FFCP PHASE1:Hg19::chr20:33851227..33851246,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:33851227..33851246,+ | |||
|description=CAGE_peak_at_chr20:33851227..33851246,+ | |description=CAGE_peak_at_chr20:33851227..33851246,+ | ||
|id=chr20:33851227..33851246,+ | |id=chr20:33851227..33851246,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.12e-20!254;CL:0000077!2.09e-09!19;CL:1000497!1.19e-08!18;CL:0002518!1.19e-08!18;CL:0000039!1.39e-08!7;CL:0000586!1.39e-08!7;CL:1000449!4.53e-08!16;CL:0002322!1.13e-07!5;CL:1000507!2.59e-07!12;CL:1000494!2.59e-07!12 | |ontology_enrichment_celltype=CL:0000066!1.12e-20!254;CL:0000077!2.09e-09!19;CL:1000497!1.19e-08!18;CL:0002518!1.19e-08!18;CL:0000039!1.39e-08!7;CL:0000586!1.39e-08!7;CL:1000449!4.53e-08!16;CL:0002322!1.13e-07!5;CL:1000507!2.59e-07!12;CL:1000494!2.59e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.00e-13;7!CL:0000586;8.00e-13;7!CL:0000540;1.24e-08;6!CL:0000404;1.24e-08;6!CL:0000313;8.90e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.11e-13,253;CL:0000039,8.39e-13,7;CL:0000586,8.39e-13,7;CL:0000540,1.45e-08,6;CL:0000031,1.45e-08,6;CL:0000404,1.45e-08,6;CL:0000313,8.21e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.38e-13;10!UBERON:0005564;1.38e-13;10!UBERON:0008947;1.30e-12;29!CL:0000031;1.24e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.65e-22!106;DOID:0050687!9.87e-18!143;DOID:14566!2.42e-12!239;DOID:162!1.18e-11!235;DOID:299!6.52e-07!25 | |||
|ontology_enrichment_disease_v019=DOID:2152;8.90e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.25e-19,106;DOID:0050687,9.06e-13,143;DOID:14566,7.16e-10,239;DOID:162,2.98e-09,235;DOID:2152,8.21e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.69e-14!9;UBERON:0002113!2.75e-11!27;UBERON:0003918!2.75e-11!27;UBERON:0005095!2.75e-11!27;UBERON:0007687!2.75e-11!27;UBERON:0006554!3.17e-10!44;UBERON:0000058!4.33e-10!26;UBERON:0000489!5.73e-10!32;UBERON:0001008!7.25e-10!45;UBERON:0005172!1.48e-09!55;UBERON:0005173!1.48e-09!55;UBERON:0006555!5.13e-09!17;UBERON:0005103!5.13e-09!17;UBERON:0000083!5.13e-09!17;UBERON:0009201!5.13e-09!17;UBERON:0004819!5.13e-09!17;UBERON:0006553!5.13e-09!17;UBERON:0003074!5.13e-09!17;UBERON:0003060!5.13e-09!17;UBERON:0000080!2.32e-08!18;UBERON:0002120!2.32e-08!18;UBERON:0004875!2.32e-08!18;UBERON:0005721!2.32e-08!18;UBERON:0005754!2.32e-08!18;UBERON:0007297!2.32e-08!18;UBERON:0004211!4.53e-08!16;UBERON:0001285!4.53e-08!16;UBERON:0007684!4.53e-08!16;UBERON:0003220!4.53e-08!16;UBERON:0004208!4.53e-08!16;UBERON:0001048!4.73e-08!168;UBERON:0002417!5.54e-08!61;UBERON:0000916!5.54e-08!61;UBERON:0003064!6.62e-08!37;UBERON:0003886!1.58e-07!63;UBERON:0000466!2.03e-07!126;UBERON:0009773!2.59e-07!12;UBERON:0001231!2.59e-07!12;UBERON:0004810!2.59e-07!12;UBERON:0004876!2.97e-07!20;UBERON:0008947!5.21e-07!38;UBERON:0003258!5.21e-07!38;UBERON:0002553!6.83e-07!70;UBERON:0003887!8.78e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.11e-19;9!UBERON:0001557;1.11e-19;9!UBERON:0000473;3.14e-11;8!UBERON:0003101;2.27e-08;22!UBERON:0000079;2.27e-08;22!UBERON:0003135;3.53e-08;11!UBERON:0000072;8.81e-08;37!UBERON:0000065;1.16e-07;44!UBERON:0004911;8.90e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.26e-20,9;UBERON:0000473,3.27e-11,8;UBERON:0008947,2.59e-09,38;UBERON:0003258,2.59e-09,38;UBERON:0001557,4.28e-09,19;UBERON:0003101,2.29e-08,22;UBERON:0000079,2.29e-08,22;UBERON:0003135,3.64e-08,11;UBERON:0000072,3.00e-07,47;UBERON:0004911,8.21e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0.853815942907168,0.265059536642971,0.232387885739037,0.829288440122964,1.26160425437814,2.91981887260664,0,0,0,0,0,1.77460200059766,1.18009283054671,1.44606617930089,1.98529150918309,0.871517776369625,1.18635309555548,0.943819157121151,2.35465758150415,0.38474715694639,0,0,0,0,0,0,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,3.02148623979056,0.601519410909855,0,0,0,0,0,0.308061348417659,2.35304930753057,0,0.527758144464379,0,0,0.431831832204279,0,0.812839312631559,0.501689773854853,1.78413391131527,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0.409074730008619,0,0,0.718946809178615,1.43216939740487,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.663475559587348,0.591095237907095,0,0,0,0.0769502585037971,0.227884111694002,0,0.359030577639089,0.325942115766024,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0.210998064528027,9.30427006507142,5.37141671448975,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0.173559738335131,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0,0,1.75996244461323,0.240476460754601,0,0.19980960958213,0,0,0,0.432164393964449,0,0.235694034616795,0.815425236441684,1.15063130943567,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0.885847333632739,0,0,0,2.25054407851027,2.47570985875021,4.15440338029185,0,0,0,0,1.10327990218877,0.681909645754975,0,0,0.383830394638891,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0,0,0,0,0,0,1.71086837884329,0,0.533937062838473,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,1.14681839138014,0,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.07220795687463,0.260994291965212,0,0.926089897295336,0.244736704506468,0.358177682162975,1.85280868296583,2.85069264452319,0,1.15748422962549,0.675769762612291,0.512483037175893,1.38172136692479,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.60511520611056,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6002644994473,0.222462803784138,0,0,0,0,4.75040700680967,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,3.46751838573156,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.630832124175395,0.655593431782173,0.253397002022874,4.28353084916323,4.54269588951453,4.59474497674225,3.0084904715085,0,0,0,0,0.426467963801962,0,0,0,0,0.25458863311266,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0.853815942907168,0.265059536642971,0.232387885739037,0.829288440122964,1.26160425437814,2.91981887260664,0,0,0,0,0,1.77460200059766,1.18009283054671,1.44606617930089,1.98529150918309,0.871517776369625,1.18635309555548,0.943819157121151,2.35465758150415,0.38474715694639,0,0,0,0,0,0,0,0,3.19769940212095,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,3.02148623979056,0.601519410909855,0,0,0,0,0,0.308061348417659,2.35304930753057,0,0.527758144464379,0,0,0.431831832204279,0,0.812839312631559,0.501689773854853,1.78413391131527,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55722532125772,0,0,0,0,0,0,0,0.63337622438398,0,0,0,0.409074730008619,0,0,0.718946809178615,1.43216939740487,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.663475559587348,0.591095237907095,0,0,0,0.0769502585037971,0.227884111694002,0,0.359030577639089,0.325942115766024,0.31900115973192,0.641183153813036,0,0,0,0,0,0,0,0,0,0.210998064528027,9.30427006507142,5.37141671448975,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99226682220855,0,0.173559738335131,0,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0,0,0,0,0,0,1.75996244461323,0.240476460754601,0,0.19980960958213,0,0,0,0.432164393964449,0,0.235694034616795,0.815425236441684,1.15063130943567,0,0,0,0,0,0,0,0,0,0,0.599037001496973,0,0,0.0671834724867263,0,0,0.236349546921671,0.164831716762333,0.26961417541674,0.885847333632739,0,0,0,2.25054407851027,2.47570985875021,4.15440338029185,0,0,0,0,1.10327990218877,0.681909645754975,0,0,0.383830394638891,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0,0,0,0,0,0,1.71086837884329,0,0.533937062838473,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,1.14681839138014,0,0.0620964029413835,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,1.07220795687463,0.260994291965212,0,0.926089897295336,0.244736704506468,0.358177682162975,1.85280868296583,2.85069264452319,0,1.15748422962549,0.675769762612291,0.512483037175893,1.38172136692479,0,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.60511520611056,0,0,0.327543835020193,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6002644994473,0.222462803784138,0,0,0,0,4.75040700680967,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,3.46751838573156,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0.630832124175395,0.655593431782173,0.253397002022874,4.28353084916323,4.54269588951453,4.59474497674225,3.0084904715085,0,0,0,0,0.426467963801962,0,0,0,0,0.25458863311266,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:33851227..33851246,+ | |short_description=p@chr20:33851227..33851246,+ | ||
}} | }} |
Latest revision as of 13:22, 28 July 2015
Short description: | p@chr20:33851227..33851246, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:33851227..33851246, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.11e-13 | 253 |
germ line cell | 8.39e-13 | 7 |
germ cell | 8.39e-13 | 7 |
neuron | 1.45e-08 | 6 |
neuroblast | 1.45e-08 | 6 |
electrically signaling cell | 1.45e-08 | 6 |
serous secreting cell | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.26e-20 | 9 |
testis | 3.27e-11 | 8 |
respiratory primordium | 2.59e-09 | 38 |
endoderm of foregut | 2.59e-09 | 38 |
upper respiratory tract | 4.28e-09 | 19 |
male organism | 2.29e-08 | 22 |
male reproductive system | 2.29e-08 | 22 |
male reproductive organ | 3.64e-08 | 11 |
segment of respiratory tract | 3.00e-07 | 47 |
epithelium of female gonad | 8.21e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.25e-19 | 106 |
cell type cancer | 9.06e-13 | 143 |
disease of cellular proliferation | 7.16e-10 | 239 |
cancer | 2.98e-09 | 235 |
ovary epithelial cancer | 8.21e-07 | 1 |