FFCP PHASE1:Hg19::chr20:45997932..45997935,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:45997932..45997935,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_at_chr20:45997932..45997935,- | |description=CAGE_peak_at_chr20:45997932..45997935,- | ||
|id=chr20:45997932..45997935,- | |id=chr20:45997932..45997935,- | ||
|ontology_enrichment_celltype=CL:0002322!2.75e-62!5;CL:0000039!4.43e-29!7;CL:0000586!4.43e-29!7;CL:0000540!3.86e-19!6;CL:0000031!3.86e-19!6;CL:0000404!3.86e-19!6;CL:0000047!1.61e-14!8;CL:0000148!9.41e-12!10;CL:0000541!9.41e-12!10;CL:0000147!1.49e-08!14;CL:0000133!5.71e-07!59 | |ontology_enrichment_celltype=CL:0002322!2.75e-62!5;CL:0000039!4.43e-29!7;CL:0000586!4.43e-29!7;CL:0000540!3.86e-19!6;CL:0000031!3.86e-19!6;CL:0000404!3.86e-19!6;CL:0000047!1.61e-14!8;CL:0000148!9.41e-12!10;CL:0000541!9.41e-12!10;CL:0000147!1.49e-08!14;CL:0000133!5.71e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000039;9.26e-43;7!CL:0000586;9.26e-43;7!CL:0002322;2.08e-27;5!CL:0002321;7.41e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.27e-43,7;CL:0000586,9.27e-43,7;CL:0002322,1.82e-27,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.07e-30;10!UBERON:0005564;3.07e-30;10 | |||
|ontology_enrichment_disease=DOID:3095!4.65e-20!22;DOID:2994!4.65e-20!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.12e-14;22!DOID:2994;3.12e-14;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.13e-14,22;DOID:2994,3.13e-14,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.70e-25!8;UBERON:0003135!1.21e-18!11;UBERON:0000991!6.83e-15!21;UBERON:0009196!6.83e-15!21;UBERON:0009117!6.83e-15!21;UBERON:0005564!6.83e-15!21;UBERON:0004176!3.25e-14!22;UBERON:0001882!2.07e-13!1;UBERON:0005403!2.07e-13!1;UBERON:0003101!1.88e-09!22;UBERON:0000079!1.88e-09!22;UBERON:0002323!9.36e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.51e-37;8!UBERON:0003135;1.40e-27;11!UBERON:0000991;7.18e-15;21!UBERON:0003101;3.12e-14;22!UBERON:0000079;3.12e-14;22!UBERON:0000922;3.50e-12;49!UBERON:0002323;5.05e-07;45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.51e-37,8;UBERON:0003135,1.40e-27,11;UBERON:0000991,7.18e-15,21;UBERON:0009196,7.18e-15,21;UBERON:0009117,7.18e-15,21;UBERON:0005564,7.18e-15,21;UBERON:0004176,3.13e-14,22;UBERON:0003101,3.13e-14,22;UBERON:0000079,3.13e-14,22;UBERON:0002323,3.48e-07,46;UBERON:0003133,6.51e-07,48;UBERON:0004458,8.74e-07,49 | |||
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|short_description=p@chr20:45997932..45997935,- | |short_description=p@chr20:45997932..45997935,- | ||
}} | }} |
Latest revision as of 14:47, 28 July 2015
Short description: | p@chr20:45997932..45997935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:45997932..45997935, - |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.27e-43 | 7 |
germ cell | 9.27e-43 | 7 |
embryonic stem cell | 1.82e-27 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 1.51e-37 | 8 |
male reproductive organ | 1.40e-27 | 11 |
gonad | 7.18e-15 | 21 |
indifferent external genitalia | 7.18e-15 | 21 |
indifferent gonad | 7.18e-15 | 21 |
gonad primordium | 7.18e-15 | 21 |
external genitalia | 3.13e-14 | 22 |
male organism | 3.13e-14 | 22 |
male reproductive system | 3.13e-14 | 22 |
body cavity | 3.48e-07 | 46 |
reproductive organ | 6.51e-07 | 48 |
body cavity or lining | 8.74e-07 | 49 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.13e-14 | 22 |
germ cell cancer | 3.13e-14 | 22 |