FFCP PHASE1:Hg19::chr17:18160584..18160595,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:18160584..18160595,- | |||
|description=CAGE_peak_at_chr17:18160584..18160595,- | |description=CAGE_peak_at_chr17:18160584..18160595,- | ||
|id=chr17:18160584..18160595,- | |id=chr17:18160584..18160595,- | ||
|ontology_enrichment_celltype=CL:0000066!3.32e-28!254;CL:0002076!1.05e-15!43;CL:0000223!1.24e-12!59;CL:0002368!5.85e-11!13;CL:1000507!7.04e-10!12;CL:1000494!7.04e-10!12;CL:1000449!2.38e-09!16;CL:0000239!5.35e-09!3;CL:1000615!5.35e-09!3;CL:0002306!5.35e-09!3;CL:0002166!8.52e-09!3;CL:0002159!1.46e-08!13;CL:0002621!1.97e-08!3;CL:1000497!3.89e-08!18;CL:0002518!3.89e-08!18;CL:0000076!4.33e-08!62;CL:0000220!4.68e-07!246;CL:0002681!6.18e-07!13;CL:0002584!6.18e-07!13;CL:0002202!6.33e-07!9;CL:0002632!6.33e-07!9;CL:0002321!6.36e-07!248 | |ontology_enrichment_celltype=CL:0000066!3.32e-28!254;CL:0002076!1.05e-15!43;CL:0000223!1.24e-12!59;CL:0002368!5.85e-11!13;CL:1000507!7.04e-10!12;CL:1000494!7.04e-10!12;CL:1000449!2.38e-09!16;CL:0000239!5.35e-09!3;CL:1000615!5.35e-09!3;CL:0002306!5.35e-09!3;CL:0002166!8.52e-09!3;CL:0002159!1.46e-08!13;CL:0002621!1.97e-08!3;CL:1000497!3.89e-08!18;CL:0002518!3.89e-08!18;CL:0000076!4.33e-08!62;CL:0000220!4.68e-07!246;CL:0002681!6.18e-07!13;CL:0002584!6.18e-07!13;CL:0002202!6.33e-07!9;CL:0002632!6.33e-07!9;CL:0002321!6.36e-07!248 | ||
|ontology_enrichment_celltype_v019=CL:0000239;3.69e-12;3!CL:1000615;3.69e-12;3!CL:0002306;3.69e-12;3!CL:0002166;1.77e-11;3!CL:0002327;4.07e-09;4!CL:1000449;5.64e-09;15!CL:1000507;6.07e-08;10!CL:1000494;6.07e-08;10!CL:1000497;6.22e-08;17!CL:0002518;6.22e-08;17!CL:0002681;8.65e-07;12!CL:0002584;8.65e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.38e-13,253;CL:0000239,3.49e-12,3;CL:1000615,3.49e-12,3;CL:0002306,3.49e-12,3;CL:0002166,1.22e-11,3;CL:0002327,4.89e-09,4;CL:1000449,5.25e-09,15;CL:1000507,5.59e-08,10;CL:1000494,5.59e-08,10;CL:1000497,5.84e-08,17;CL:0002518,5.84e-08,17;CL:0002681,8.49e-07,12;CL:0002584,8.49e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008425;7.96e-10;1 | |||
|ontology_enrichment_disease=DOID:305!8.81e-13!106;DOID:0050687!5.47e-09!143 | |ontology_enrichment_disease=DOID:305!8.81e-13!106;DOID:0050687!5.47e-09!143 | ||
|ontology_enrichment_disease_v019=DOID:4468;9.66e-17;2!DOID:3111;3.12e-09;1!DOID:3603;3.12e-09;1!DOID:299;8.00e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.23e-16,2;DOID:3111,3.00e-09,1;DOID:3603,3.00e-09,1;DOID:299,8.51e-08,25;DOID:305,2.42e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.86e-12!169;UBERON:0000925!3.86e-12!169;UBERON:0006595!3.86e-12!169;UBERON:0001004!1.11e-10!72;UBERON:0003064!3.31e-10!37;UBERON:0005153!4.96e-10!37;UBERON:0000058!5.39e-10!26;UBERON:0009773!7.04e-10!12;UBERON:0001231!7.04e-10!12;UBERON:0004810!7.04e-10!12;UBERON:0005911!9.02e-10!82;UBERON:0004211!2.38e-09!16;UBERON:0001285!2.38e-09!16;UBERON:0007684!2.38e-09!16;UBERON:0003220!2.38e-09!16;UBERON:0004208!2.38e-09!16;UBERON:0006554!3.53e-09!44;UBERON:0006853!5.35e-09!3;UBERON:0007685!5.35e-09!3;UBERON:0004134!5.35e-09!3;UBERON:0001008!6.79e-09!45;UBERON:0000161!7.17e-09!35;UBERON:0006555!1.05e-08!17;UBERON:0005103!1.05e-08!17;UBERON:0000083!1.05e-08!17;UBERON:0009201!1.05e-08!17;UBERON:0004819!1.05e-08!17;UBERON:0006553!1.05e-08!17;UBERON:0003074!1.05e-08!17;UBERON:0003060!1.05e-08!17;UBERON:0005157!1.06e-08!51;UBERON:0001949!1.97e-08!3;UBERON:0000466!3.07e-08!126;UBERON:0001007!3.19e-08!155;UBERON:0001555!3.19e-08!155;UBERON:0007026!3.19e-08!155;UBERON:0000080!3.89e-08!18;UBERON:0002120!3.89e-08!18;UBERON:0004875!3.89e-08!18;UBERON:0005721!3.89e-08!18;UBERON:0005754!3.89e-08!18;UBERON:0007297!3.89e-08!18;UBERON:0000077!4.63e-08!130;UBERON:0005177!6.63e-08!107;UBERON:0000065!8.78e-08!53;UBERON:0000464!1.10e-07!104;UBERON:0001851!2.19e-07!16;UBERON:0009569!2.84e-07!113;UBERON:0004876!3.60e-07!20;UBERON:0001225!6.18e-07!13;UBERON:0008987!6.18e-07!13;UBERON:0003887!9.33e-07!21 | |ontology_enrichment_uberon=UBERON:0004119!3.86e-12!169;UBERON:0000925!3.86e-12!169;UBERON:0006595!3.86e-12!169;UBERON:0001004!1.11e-10!72;UBERON:0003064!3.31e-10!37;UBERON:0005153!4.96e-10!37;UBERON:0000058!5.39e-10!26;UBERON:0009773!7.04e-10!12;UBERON:0001231!7.04e-10!12;UBERON:0004810!7.04e-10!12;UBERON:0005911!9.02e-10!82;UBERON:0004211!2.38e-09!16;UBERON:0001285!2.38e-09!16;UBERON:0007684!2.38e-09!16;UBERON:0003220!2.38e-09!16;UBERON:0004208!2.38e-09!16;UBERON:0006554!3.53e-09!44;UBERON:0006853!5.35e-09!3;UBERON:0007685!5.35e-09!3;UBERON:0004134!5.35e-09!3;UBERON:0001008!6.79e-09!45;UBERON:0000161!7.17e-09!35;UBERON:0006555!1.05e-08!17;UBERON:0005103!1.05e-08!17;UBERON:0000083!1.05e-08!17;UBERON:0009201!1.05e-08!17;UBERON:0004819!1.05e-08!17;UBERON:0006553!1.05e-08!17;UBERON:0003074!1.05e-08!17;UBERON:0003060!1.05e-08!17;UBERON:0005157!1.06e-08!51;UBERON:0001949!1.97e-08!3;UBERON:0000466!3.07e-08!126;UBERON:0001007!3.19e-08!155;UBERON:0001555!3.19e-08!155;UBERON:0007026!3.19e-08!155;UBERON:0000080!3.89e-08!18;UBERON:0002120!3.89e-08!18;UBERON:0004875!3.89e-08!18;UBERON:0005721!3.89e-08!18;UBERON:0005754!3.89e-08!18;UBERON:0007297!3.89e-08!18;UBERON:0000077!4.63e-08!130;UBERON:0005177!6.63e-08!107;UBERON:0000065!8.78e-08!53;UBERON:0000464!1.10e-07!104;UBERON:0001851!2.19e-07!16;UBERON:0009569!2.84e-07!113;UBERON:0004876!3.60e-07!20;UBERON:0001225!6.18e-07!13;UBERON:0008987!6.18e-07!13;UBERON:0003887!9.33e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0006853;3.69e-12;3!UBERON:0007685;3.69e-12;3!UBERON:0004134;3.69e-12;3!UBERON:0004913;1.11e-09;1!UBERON:0003703;1.11e-09;1!UBERON:0001174;1.11e-09;1!UBERON:0004914;1.11e-09;1!UBERON:0002394;2.66e-09;4!UBERON:0003928;2.66e-09;4!UBERON:0001911;4.07e-09;4!UBERON:0001851;5.64e-09;15!UBERON:0006555;5.64e-09;15!UBERON:0004819;5.64e-09;15!UBERON:0001285;5.64e-09;15!UBERON:0007684;5.64e-09;15!UBERON:0001708;7.88e-09;4!UBERON:0008895;7.88e-09;4!UBERON:0004211;6.07e-08;10!UBERON:0009773;6.07e-08;10!UBERON:0001231;6.07e-08;10!UBERON:0004810;6.07e-08;10!UBERON:0011159;3.13e-07;5!UBERON:0001225;8.65e-07;12!UBERON:0008987;8.65e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.49e-12,3;UBERON:0007685,3.49e-12,3;UBERON:0004134,3.49e-12,3;UBERON:0004913,1.12e-09,1;UBERON:0003703,1.12e-09,1;UBERON:0001174,1.12e-09,1;UBERON:0004914,1.12e-09,1;UBERON:0001851,4.83e-09,15;UBERON:0001911,4.89e-09,4;UBERON:0005333,4.89e-09,4;UBERON:0008425,4.89e-09,4;UBERON:0005311,4.89e-09,4;UBERON:0004211,5.25e-09,15;UBERON:0009773,5.25e-09,15;UBERON:0001231,5.25e-09,15;UBERON:0001285,5.25e-09,15;UBERON:0007684,5.25e-09,15;UBERON:0004208,5.25e-09,15;UBERON:0001708,5.97e-09,4;UBERON:0008895,5.97e-09,4;UBERON:0006555,1.89e-08,16;UBERON:0004819,1.89e-08,16;UBERON:0004810,5.59e-08,10;UBERON:0011159,2.51e-07,5;UBERON:0001225,8.49e-07,12;UBERON:0008987,8.49e-07,12 | |||
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|short_description=p@chr17:18160584..18160595,- | |short_description=p@chr17:18160584..18160595,- | ||
}} | }} |
Latest revision as of 14:26, 25 July 2015
Short description: | p@chr17:18160584..18160595, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:18160584..18160595, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.38e-13 | 253 |
brush border epithelial cell | 3.49e-12 | 3 |
kidney cortex tubule cell | 3.49e-12 | 3 |
epithelial cell of proximal tubule | 3.49e-12 | 3 |
epithelial cell of Malassez | 1.22e-11 | 3 |
mammary gland epithelial cell | 4.89e-09 | 4 |
epithelial cell of nephron | 5.25e-09 | 15 |
kidney tubule cell | 5.59e-08 | 10 |
nephron tubule epithelial cell | 5.59e-08 | 10 |
kidney cell | 5.84e-08 | 17 |
kidney epithelial cell | 5.84e-08 | 17 |
kidney cortical cell | 8.49e-07 | 12 |
renal cortical epithelial cell | 8.49e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.49e-12 | 3 |
region of nephron tubule | 3.49e-12 | 3 |
proximal tubule | 3.49e-12 | 3 |
hepatopancreatic ampulla | 1.12e-09 | 1 |
extrahepatic bile duct | 1.12e-09 | 1 |
common bile duct | 1.12e-09 | 1 |
duodenal papilla | 1.12e-09 | 1 |
cortex | 4.83e-09 | 15 |
mammary gland | 4.89e-09 | 4 |
mammary bud | 4.89e-09 | 4 |
mammary ridge | 4.89e-09 | 4 |
mammary placode | 4.89e-09 | 4 |
nephron epithelium | 5.25e-09 | 15 |
renal tubule | 5.25e-09 | 15 |
nephron tubule | 5.25e-09 | 15 |
nephron | 5.25e-09 | 15 |
uriniferous tubule | 5.25e-09 | 15 |
nephrogenic mesenchyme | 5.25e-09 | 15 |
jaw skeleton | 5.97e-09 | 4 |
splanchnocranium | 5.97e-09 | 4 |
excretory tube | 1.89e-08 | 16 |
kidney epithelium | 1.89e-08 | 16 |
nephron tubule epithelium | 5.59e-08 | 10 |
primary subdivision of cranial skeletal system | 2.51e-07 | 5 |
cortex of kidney | 8.49e-07 | 12 |
renal parenchyma | 8.49e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.23e-16 | 2 |
cystadenocarcinoma | 3.00e-09 | 1 |
mucinous cystadenocarcinoma | 3.00e-09 | 1 |
adenocarcinoma | 8.51e-08 | 25 |
carcinoma | 2.42e-07 | 106 |