FFCP PHASE1:Hg19::chr21:28209967..28209983,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-232bp_to_AL355724_5end | |association_with_transcript=-232bp_to_AL355724_5end | ||
|cluster_id=chr21:28209967..28209983,- | |||
|description=CAGE_peak_1_at_AL355724_5end | |description=CAGE_peak_1_at_AL355724_5end | ||
|id=chr21:28209967..28209983,- | |id=chr21:28209967..28209983,- | ||
|ontology_enrichment_celltype=CL:0000055!2.10e-09!180;CL:0000057!2.65e-09!75;CL:0002620!4.69e-07!23 | |ontology_enrichment_celltype=CL:0000055!2.10e-09!180;CL:0000057!2.65e-09!75;CL:0002620!4.69e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.18e-08;23!CL:0000569;6.01e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,1.21e-08,23;CL:0000569,5.83e-07,4;CL:0000011,5.83e-07,4;CL:0000153,9.32e-07,9;CL:0000447,9.32e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000011;6.01e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!2.21e-08!69;UBERON:0007100!5.77e-08!27;UBERON:0000948!3.75e-07!24;UBERON:0005498!3.75e-07!24;UBERON:0004140!3.75e-07!24;UBERON:0009881!3.75e-07!24;UBERON:0004141!3.75e-07!24;UBERON:0003084!3.75e-07!24;UBERON:0007005!3.75e-07!24;UBERON:0004139!3.75e-07!24;UBERON:0004291!3.75e-07!24 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.15e-07,41;UBERON:0000948,3.40e-07,24;UBERON:0005498,3.40e-07,24;UBERON:0004140,3.40e-07,24;UBERON:0009881,3.40e-07,24;UBERON:0004141,3.40e-07,24;UBERON:0003084,3.40e-07,24;UBERON:0007005,3.40e-07,24;UBERON:0004139,3.40e-07,24;UBERON:0004291,3.40e-07,24;UBERON:0007100,3.80e-07,27 | |||
|phase1_expression=4.1786027232228,5.1384125733836,0.845726424575827,8.00586386825043,3.5756887554183,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0.495065411840187,0.662794751455832,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,3.35350429851818,0.639312809217652,4.69870898099936,2.50668955317945,10.1392563272577,0,2.91980922181582,0,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0.56530794192401,0.838998872419812,0.550236083880135,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,6.46063537203914,0.379891534993739,2.38336525463794,9.46560848471085,6.38403087957043,0.560677600142307,0,0.49333509683432,0,0.269421344139376,0.326923806226917,0.151357427644931,0,0,0,0,0.448346041655403,0.117434498643765,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0.919463387397059,0.751190294532984,0.113432183160021,2.69084453533293,2.34913127700424,3.39091041855299,4.50136644126603,0.824420233907511,3.86460810068444,0.37223371266318,1.85653965465393,0.584622030967192,3.78650661366172,1.10459878370759,2.26304479546337,2.84007674013291,1.0075209822764,3.05209066158878,0.386521706326594,0.818238361772504,0.573609190778008,0,0.132529768321485,0,0.207322110030741,0,0,0,0,0,6.03678306441573,2.88751792667834,0.118306800039844,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0,0.590789906681404,0,0,0,1.09750285408626,0,1.70899253099772,0.185176890317059,0.325808305310325,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,3.02367830757947,0.850650583454319,0.895585227028483,0.290633938513962,0.383382679165211,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0,0,0.845302752556,1.06375246633948,0,0,0,1.3321108950805,4.14636181608628,5.42621605391443,0,0,2.13235169245527,0,0.301439377059586,1.74306691720059,0.099972991182057,0,0,0,0.479249710983165,2.29723871668228,0,1.44781306667579,2.87666851570537,0.537182889719687,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0.858840442033979,2.50085260529839,0.271265023699736,1.45579603071565,7.85087550707512,2.83864347061082,1.52283839490527,0,0,1.03473071292505,1.32845119707087,0.553107505625109,0.521301686808497,0,0,0,0,0,0,0,0.30239029332968,1.73675465473144,0.767309866440312,2.24528075546459,1.28139149255701,0.511707249066704,4.02134802859019,2.96836132889982,0.462629081407967,0.177561725313127,0.0821271560138091,0.519254429183621,0.464841513839837,0,3.00759705454927,0.0920809889358963,2.41110341145674,2.54927635209404,1.83574180943194,0,1.23224539367064,0,1.46139224653261,0.527758144464379,0,0,0.863663664408557,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.671624264166535,0,0,0,0.328014645699706,0,0.309123034943167,0.183138929636687,0.082509499920588,0,0.650060246036521,0,0.096670718292122,0.462145851343933,0.307007349452259,0.137836572484531,0.107420244868274,0.145016693914229,0.596586391912706,0.178064071293475,0.826424576804891,0.576570202095319,0.255225424989168,0.2023155617111,1.39453664789186,9.12955805808856,0,1.23213432070436,0,0.869932992075073,0.37064843820784,0,0,0.316379424718726,0.762520775695299,0,0.855877976067841,0,0,0.359744915166629,1.09814811894422,0.824686816419805,0.202182481573316,6.34041284692033,1.26377536871694,0.975267478179181,4.6305563029944,0,1.77449884830381,4.3835683905651,3.39024349860728,0,6.6343897524122,2.19225442626881,0,0.655894752046633,0,0,0.563391205064483,0.430234056612155,0,0,0,5.06658324714394,4.61012850143863,0,0,0,0.670302275535787,0,0.188287601553558,0,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0.640944426764839,1.92495971052672,0,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.95497793895076,0,0,0,0.140669416410513,0.111308705022906,0,0.422250816255987,0.996239941255349,0.828851746593443,0,0.102268682502155,0,1.24415835064723,0,0.179021174675609,0,0.295930216910801,0,0,0,0.371072392647405,0,0,0,0,0,0,0.472775363535873,0.344743373241465,0,0,0,0.723578631752448,0,0.110579259931225,0.295547618953547,0.658156191461918,0.10893846351899,0,0.153900517007594,0.227884111694002,1.61394733071642,0.179515288819544,0.217294743844016,11.1650405906172,1.28236630762607,12.7928346244472,0,0,0,0,0,0,0,0.158936578980379,1.05499032264014,0.979396848954886,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0.394584402849391,0,0,0.63186579628488,0,0.622129148383483,0,0,0,0,0,0,0.347119476670262,0,0.435296032902013,0.698906672968121,0.171986032471617,0.483781656445426,0.950161122120412,0.328461828212837,0.0969890164884194,0,1.35588444468319,0,0,0.126621591911757,0,0.160317640503067,1.280717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| ||
|short_description=p1@AL355724 | |short_description=p1@AL355724 | ||
}} | }} |
Latest revision as of 17:05, 28 July 2015
Short description: | p1@AL355724 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AL355724_5end |
Coexpression cluster: | NA |
Association with transcript: | -232bp_to_AL355724_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 1.21e-08 | 23 |
cardiac mesenchymal cell | 5.83e-07 | 4 |
migratory trunk neural crest cell | 5.83e-07 | 4 |
GAG secreting cell | 9.32e-07 | 9 |
carbohydrate secreting cell | 9.32e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.15e-07 | 41 |
heart | 3.40e-07 | 24 |
primitive heart tube | 3.40e-07 | 24 |
primary heart field | 3.40e-07 | 24 |
anterior lateral plate mesoderm | 3.40e-07 | 24 |
heart tube | 3.40e-07 | 24 |
heart primordium | 3.40e-07 | 24 |
cardiac mesoderm | 3.40e-07 | 24 |
cardiogenic plate | 3.40e-07 | 24 |
heart rudiment | 3.40e-07 | 24 |
primary circulatory organ | 3.80e-07 | 27 |