FFCP PHASE1:Hg19::chr21:43816124..43816151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64699 | |EntrezGene=64699 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11877 | |HGNC=11877 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=16bp_to_ENST00000433957_5end | |association_with_transcript=16bp_to_ENST00000433957_5end | ||
|cluster_id=chr21:43816124..43816151,- | |||
|coexpression_cluster_id=C2633 | |||
|description=CAGE_peak_2_at_TMPRSS3_5end | |description=CAGE_peak_2_at_TMPRSS3_5end | ||
|id=chr21:43816124..43816151,- | |id=chr21:43816124..43816151,- | ||
|ontology_enrichment_celltype=CL:0002150!5.66e-07!3;CL:0000861!5.66e-07!3 | |ontology_enrichment_celltype=CL:0002150!5.66e-07!3;CL:0000861!5.66e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002178;6.74e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-08,253;CL:0002178,4.89e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.94e-14;29 | |||
|ontology_enrichment_disease=DOID:305!1.28e-13!106;DOID:0050687!8.52e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.16e-20,106;DOID:0050687,4.57e-14,143;DOID:162,1.23e-12,235;DOID:14566,2.98e-12,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.12e-24!115;UBERON:0001049!1.91e-21!57;UBERON:0005068!1.91e-21!57;UBERON:0006241!1.91e-21!57;UBERON:0007135!1.91e-21!57;UBERON:0001737!2.94e-18!9;UBERON:0002616!1.44e-17!59;UBERON:0002780!9.98e-16!41;UBERON:0001890!9.98e-16!41;UBERON:0006240!9.98e-16!41;UBERON:0003075!2.42e-15!86;UBERON:0007284!2.42e-15!86;UBERON:0003080!3.30e-15!42;UBERON:0002020!5.88e-15!34;UBERON:0003528!5.88e-15!34;UBERON:0000955!9.57e-15!69;UBERON:0006238!9.57e-15!69;UBERON:0001869!2.08e-14!32;UBERON:0002346!3.14e-14!90;UBERON:0005743!5.47e-14!86;UBERON:0001017!5.52e-14!82;UBERON:0001893!2.80e-13!34;UBERON:0002791!2.02e-12!33;UBERON:0000073!8.19e-12!94;UBERON:0001016!8.19e-12!94;UBERON:0003056!1.42e-10!61;UBERON:0002619!4.49e-10!22;UBERON:0001950!1.22e-09!20;UBERON:0001557!3.69e-09!19;UBERON:0002294!4.49e-09!7;UBERON:0001173!4.49e-09!7;UBERON:0004912!4.49e-09!7;UBERON:0002308!7.00e-09!9;UBERON:0000125!7.00e-09!9;UBERON:0000477!9.73e-09!286;UBERON:0000956!1.54e-08!25;UBERON:0000203!1.54e-08!25;UBERON:0000064!6.41e-08!219;UBERON:0000153!8.06e-08!129;UBERON:0007811!8.06e-08!129;UBERON:0003076!1.57e-07!15;UBERON:0003057!1.57e-07!15;UBERON:0002394!1.71e-07!4;UBERON:0003928!1.71e-07!4;UBERON:0002298!2.35e-07!8;UBERON:0000033!2.73e-07!123;UBERON:0000200!3.48e-07!6;UBERON:0002420!5.12e-07!9;UBERON:0007245!5.12e-07!9;UBERON:0010009!5.12e-07!9;UBERON:0010011!5.12e-07!9;UBERON:0000454!5.12e-07!9;UBERON:0000025!8.97e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.51e-50;9!UBERON:0001557;5.51e-50;9!UBERON:0002702;2.04e-11;2!UBERON:0000072;1.88e-10;37!UBERON:0000065;7.92e-09;44!UBERON:0001870;6.74e-08;3!UBERON:0004913;9.78e-07;1!UBERON:0003703;9.78e-07;1!UBERON:0001174;9.78e-07;1!UBERON:0004914;9.78e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.38e-50,9;UBERON:0001557,5.79e-28,19;UBERON:0002702,2.28e-11,2;UBERON:0001041,3.79e-11,87;UBERON:0008947,1.20e-10,38;UBERON:0003258,1.20e-10,38;UBERON:0000072,3.40e-10,47;UBERON:0000065,1.23e-08,54;UBERON:0001870,7.23e-08,3;UBERON:0004921,2.54e-07,118;UBERON:0001007,2.77e-07,145;UBERON:0001555,2.77e-07,145;UBERON:0007026,2.77e-07,145;UBERON:0001004,4.63e-07,74 | |||
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| ||
|short_description=p2@TMPRSS3 | |short_description=p2@TMPRSS3 | ||
}} | }} |
Latest revision as of 14:18, 18 September 2015
Short description: | p2@TMPRSS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMPRSS3_5end |
Coexpression cluster: | C2633_smallcell_Hep2_gall_cervical_splenic_mesothelioma_serous |
Association with transcript: | 16bp_to_ENST00000433957_5end |
EntrezGene: | TMPRSS3 |
HGNC: | 11877 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-08 | 253 |
epithelial cell of stomach | 4.89e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.38e-50 | 9 |
upper respiratory tract | 5.79e-28 | 19 |
middle frontal gyrus | 2.28e-11 | 2 |
foregut | 3.79e-11 | 87 |
respiratory primordium | 1.20e-10 | 38 |
endoderm of foregut | 1.20e-10 | 38 |
segment of respiratory tract | 3.40e-10 | 47 |
respiratory tract | 1.23e-08 | 54 |
frontal cortex | 7.23e-08 | 3 |
subdivision of digestive tract | 2.54e-07 | 118 |
digestive system | 2.77e-07 | 145 |
digestive tract | 2.77e-07 | 145 |
primitive gut | 2.77e-07 | 145 |
respiratory system | 4.63e-07 | 74 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.16e-20 | 106 |
cell type cancer | 4.57e-14 | 143 |
cancer | 1.23e-12 | 235 |
disease of cellular proliferation | 2.98e-12 | 239 |