FFCP PHASE1:Hg19::chr17:38252990..38252995,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9572 | |EntrezGene=9572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7962 | |HGNC=7962 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc010cwr.1_5end | |association_with_transcript=36bp_to_uc010cwr.1_5end | ||
|cluster_id=chr17:38252990..38252995,- | |||
|description=CAGE_peak_12_at_NR1D1_5end | |description=CAGE_peak_12_at_NR1D1_5end | ||
|id=chr17:38252990..38252995,- | |id=chr17:38252990..38252995,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002601;1.40e-14;1!CL:0002593;6.14e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002601,2.11e-14,1;CL:0002593,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-13!115;UBERON:0001049!5.76e-07!57;UBERON:0005068!5.76e-07!57;UBERON:0006241!5.76e-07!57;UBERON:0007135!5.76e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0001871;1.27e-08;6!UBERON:0002771;3.81e-08;2!UBERON:0001905;6.14e-08;2!UBERON:0002757;6.14e-08;2!UBERON:0010134;6.14e-08;2!UBERON:0005408;6.14e-08;2!UBERON:0002456;6.14e-08;2!UBERON:0001899;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001871,1.37e-08,6;UBERON:0002771,3.82e-08,2;UBERON:0002456,8.04e-08,2;UBERON:0001905,8.60e-08,2;UBERON:0002757,8.60e-08,2;UBERON:0010134,8.60e-08,2;UBERON:0005408,8.60e-08,2;UBERON:0001899,8.60e-08,2 | |||
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| ||
|short_description=p12@NR1D1 | |short_description=p12@NR1D1 | ||
}} | }} |
Latest revision as of 23:58, 19 September 2015
Short description: | p12@NR1D1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NR1D1_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_uc010cwr.1_5end |
EntrezGene: | NR1D1 |
HGNC: | 7962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
uterine smooth muscle cell | 2.11e-14 | 1 |
smooth muscle cell of the internal thoracic artery | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
temporal lobe | 1.37e-08 | 6 |
middle temporal gyrus | 3.82e-08 | 2 |
internal thoracic artery | 8.04e-08 | 2 |
pineal body | 8.60e-08 | 2 |
regional part of epithalamus | 8.60e-08 | 2 |
secretory circumventricular organ | 8.60e-08 | 2 |
circumventricular organ | 8.60e-08 | 2 |
epithalamus | 8.60e-08 | 2 |