FFCP PHASE1:Hg19::chr21:44842602..44842620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:44842602..44842620,- | |||
|coexpression_cluster_id=C3717 | |||
|description=CAGE_peak_at_chr21:44842602..44842620,- | |description=CAGE_peak_at_chr21:44842602..44842620,- | ||
|id=chr21:44842602..44842620,- | |id=chr21:44842602..44842620,- | ||
|ontology_enrichment_celltype=CL:0002150!1.44e-08!3;CL:0000861!1.44e-08!3;CL:0000066!3.64e-08!254 | |ontology_enrichment_celltype=CL:0002150!1.44e-08!3;CL:0000861!1.44e-08!3;CL:0000066!3.64e-08!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.91e-14;29!UBERON:0001041;3.78e-08;30 | |||
|ontology_enrichment_disease=DOID:305!8.12e-18!106;DOID:0050687!1.64e-13!143;DOID:162!3.42e-09!235;DOID:0050615!5.96e-09!16;DOID:14566!6.74e-09!239;DOID:0050619!7.73e-07!1;DOID:1357!7.73e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.19e-09;3!DOID:1324;1.18e-07;15!DOID:0050615;3.14e-07;16 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.86e-11,106;DOID:4556,1.19e-09,3;DOID:0050687,1.76e-08,143;DOID:1324,1.18e-07,15;DOID:0050615,3.14e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.16e-51!9;UBERON:0008947!3.14e-31!38;UBERON:0003258!3.14e-31!38;UBERON:0000072!3.01e-25!46;UBERON:0000065!1.46e-24!53;UBERON:0001557!1.42e-23!19;UBERON:0001004!4.56e-22!72;UBERON:0001041!2.83e-15!98;UBERON:0000077!5.39e-12!130;UBERON:0004921!1.40e-10!129;UBERON:0004185!1.40e-10!129;UBERON:0001007!1.53e-10!155;UBERON:0001555!1.53e-10!155;UBERON:0007026!1.53e-10!155;UBERON:0004119!1.72e-10!169;UBERON:0000925!1.72e-10!169;UBERON:0006595!1.72e-10!169;UBERON:0000063!2.50e-10!97;UBERON:0001048!2.10e-08!168;UBERON:0002135!5.45e-07!1;UBERON:0001764!7.73e-07!1;UBERON:0001825!7.73e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.51e-12;9!UBERON:0001557;6.51e-12;9!UBERON:0000065;7.03e-10;44!UBERON:0000072;8.66e-10;37!UBERON:0002394;1.86e-07;4!UBERON:0003928;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.51e-12,9;UBERON:0008947,6.77e-11,38;UBERON:0003258,6.77e-11,38;UBERON:0000072,6.90e-09,47;UBERON:0000065,8.77e-08,54;UBERON:0001041,2.36e-07,87 | |||
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|short_description=p@chr21:44842602..44842620,- | |short_description=p@chr21:44842602..44842620,- | ||
}} | }} |
Latest revision as of 18:17, 28 July 2015
Short description: | p@chr21:44842602..44842620, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:44842602..44842620, - |
Coexpression cluster: | C3717_cervical_bronchogenic_glassy_epitheloid_Hep2_small_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 6.51e-12 | 9 |
respiratory primordium | 6.77e-11 | 38 |
endoderm of foregut | 6.77e-11 | 38 |
segment of respiratory tract | 6.90e-09 | 47 |
respiratory tract | 8.77e-08 | 54 |
foregut | 2.36e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.86e-11 | 106 |
lung large cell carcinoma | 1.19e-09 | 3 |
cell type cancer | 1.76e-08 | 143 |
lung cancer | 1.18e-07 | 15 |
respiratory system cancer | 3.14e-07 | 16 |