FFCP PHASE1:Hg19::chr22:18632700..18632764,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11274 | |EntrezGene=11274 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12616 | |HGNC=12616 | ||
|TSSclassifier=strong | |||
|UniProt=Q53Y90,Q9UMW8 | |UniProt=Q53Y90,Q9UMW8 | ||
|association_with_transcript=0bp_to_NM_017414,uc002zny.2_5end | |association_with_transcript=0bp_to_NM_017414,uc002zny.2_5end | ||
|cluster_id=chr22:18632700..18632764,+ | |||
|description=CAGE_peak_2_at_USP18_5end | |description=CAGE_peak_2_at_USP18_5end | ||
|id=chr22:18632700..18632764,+ | |id=chr22:18632700..18632764,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.89e-19!254;CL:0000071!2.16e-09!18;CL:0002546!2.16e-09!18;CL:0002139!2.98e-09!24;CL:0000076!5.48e-09!62;CL:0000115!6.03e-07!35 | |ontology_enrichment_celltype=CL:0000066!3.89e-19!254;CL:0000071!2.16e-09!18;CL:0002546!2.16e-09!18;CL:0002139!2.98e-09!24;CL:0000076!5.48e-09!62;CL:0000115!6.03e-07!35 | ||
|ontology_enrichment_celltype_v019=CL:0000071;1.60e-14;18!CL:0002139;5.09e-11;24!CL:1000413;1.76e-08;9!CL:0000076;6.59e-08;63!CL:0000115;7.63e-08;36!CL:0002543;2.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.90e-18,253;CL:0000071,1.49e-14,18;CL:0002546,1.49e-14,18;CL:0000076,1.28e-13,63;CL:0002139,4.98e-11,24;CL:0000115,3.59e-09,36;CL:1000413,1.59e-08,9;CL:0002078,9.24e-08,45;CL:0002543,1.55e-07,6;CL:0000213,9.90e-07,58;CL:0000215,9.90e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;1.60e-14;18!UBERON:0008947;1.39e-08;29 | |||
|ontology_enrichment_disease=DOID:0050687!1.23e-21!143;DOID:305!6.63e-20!106;DOID:162!2.05e-17!235;DOID:14566!7.16e-16!239 | |||
|ontology_enrichment_disease_v019=DOID:305;2.75e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.18e-26,143;DOID:305,8.15e-23,106;DOID:162,9.90e-22,235;DOID:14566,1.27e-20,239 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.16e-09!18;UBERON:0004638!2.16e-09!18;UBERON:0004852!2.16e-09!18;UBERON:0000487!4.18e-08!22;UBERON:0001007!7.51e-08!155;UBERON:0001555!7.51e-08!155;UBERON:0007026!7.51e-08!155;UBERON:0006914!1.58e-07!25;UBERON:0000077!8.30e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.60e-14;18!UBERON:0001986;1.60e-14;18!UBERON:0004852;1.60e-14;18!UBERON:0000487;1.15e-12;22!UBERON:0006914;1.95e-10;25!UBERON:0000490;4.17e-09;33!UBERON:0003915;1.76e-08;9!UBERON:0004700;1.76e-08;9!UBERON:0001917;1.76e-08;9!UBERON:0001737;9.56e-08;9!UBERON:0001557;9.56e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.49e-14,18;UBERON:0001986,1.49e-14,18;UBERON:0004852,1.49e-14,18;UBERON:0000487,1.07e-12,22;UBERON:0006914,1.82e-10,25;UBERON:0003915,1.59e-08,9;UBERON:0004700,1.59e-08,9;UBERON:0001917,1.59e-08,9;UBERON:0001737,3.29e-08,9;UBERON:0008947,6.32e-08,38;UBERON:0003258,6.32e-08,38 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.422863212287913,0,1.34088328328186,1.74467704820074,0,0,0.522371256399677,0.245733936501509,0.697801167972428,0.218441372130172,0,0.37129905888014,0,0,0,0.730310090387373,0.487932798790507,0.61560529038394,1.02000345622126,0.626909442956176,0.572471974262113,1.09499540058307,0.502170558379211,0.152826811495903,0.328402357799783,0.157421562627358,0,0,0,2.75826367343678,0.6024118375565,1.10926203050036,0,0,0.587200878669695,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0.411202997999018,0.167186495390678,0.651844533267181,0,1.94826728407911,0.111410456885174,0.294605907474837,0.443067789167242,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0.14828656316206,0.267540828089713,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.255725123687061,0,0,0.724232594804119,0.795285947051099,0,0.472674085820339,0.221729397462564,0.43917392846563,1.0478326039817,2.5500670180478,1.11235332835329,0.324547393654683,0,0.531831842075461,0,0,0,15.7022301819697,4.30117297553062,4.16568601929113,4.52246353539208,3.77549492588915,3.57653454522088,7.73281376186199,3.35941786920128,0.35576626268671,0.66944122552934,1.20848795132744,3.04108842287405,0,1.47065232138347,0.81014194788176,3.03619076165871,1.57170560838319,2.81528701208306,18.397996495906,3.79706263827252,10.2592976601028,0,0,0,0,0.12663051166458,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.942974704487816,0.326923806226917,0,0,0.234321431833797,0.312160076830321,2.2818872861778,0,0.352303495931295,0,0.280901613404497,0.816616685019573,1.10550885580591,0.103325781175765,3.56400857184616,1.7308685049499,0,0,1.17835279767846,0.875829639103749,0.831192346452549,0.877955241761676,0.30648779579902,0.901428353439581,0.680593098960126,0,0,0,0.600182192168805,0.309157587715317,0,0.37223371266318,0.168776332241266,0.194874010322397,0,0,0,0,0,0,0.193260853163297,0,1.14721838155602,0.853815942907168,1.06023814657188,1.39432731443422,0.621966330092223,0.756962552626885,0.36497735907583,0,0,0,0,0,1.8929088006375,1.68584690078102,2.6511213287183,2.20587945464788,2.83243277320128,1.89816495288877,1.34831308160164,3.92442930250692,1.15424147083917,1.4763109092493,2.80483547606892,0,0,0,0,0.590789906681404,2.20731549707325,0.491953754172454,0.343135620597051,0.109750285408626,1.1240175325762,0.904760751704678,0.0925884451585296,0.325808305310325,0,0,0.927443239800615,0.469634776943287,0.144366447761074,0.925971025153221,0.761016608938393,0.790204397959275,3.43394464837949,0.246217006087397,0,0.594524649154913,0,0.671928512795438,0.425325291727159,0,0.581267877027924,0.766765358330422,0.492663237895943,0.704387472105808,0.621984346622316,0.720599767084807,0.37872730027914,0.571481048629521,1.52795370223311,1.17217447210047,0,0.514137463516618,1.20137223137567,0,0.112131084345361,0,0,0.258543431515556,0,0.845302752556,0.531876233169741,0,0.257207374262142,0,0.266422179016099,0,0.542621605391443,0.823240336780769,0.65147236858747,0,0.791951872933429,0.301439377059586,0,0.199945982364114,0,1.00451418286425,0,0.718874566474748,0,0,0.144781306667579,0.61642896765115,0.358121926479791,0.672510863961164,0,0,0.256686072559497,1.27047312111232,1.30139853857622,1.54657762555539,0,0,0,0,0,0.49076596687656,0,0.271265023699736,0,0,0.788512075169673,1.17141414992713,0.601892199455438,0,2.0694614258501,0,1.10621501125022,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0,1.48418066444991,0.616838775210622,0.532685175939381,1.31403449622095,0,1.16210378459959,0.846016147141356,1.20303882181971,1.01289087829486,0.34444334449382,0.182091168006717,0.393373244878272,0.451199612907412,0.770153371044148,0,1.46139224653261,0.633309773357254,0,1.36074964221213,0.431831832204279,3.08454505380579,0.812839312631559,0.501689773854853,0.509752546090077,2.49322802678617,0,0,0,1.28225062558195,0.656029291399411,0.325378394664303,0.515205058238611,2.56394501491362,1.89771849817352,0,0,0,0.193341436584244,0.308097234229289,0.15350367472613,0.827019434907183,0.214840489736547,0.290033387828457,0.852266274161009,1.95870478422822,0.495854746082934,0,0.510450849978337,0.6069466851333,0,0,0,3.08033580176089,1.06461206063404,0,0.18532421910392,0.715624433709956,0,0.949138274156178,0.190630193923825,0.255897791311334,0,0.636406495851874,0,0.179872457583315,0.274537029736055,0.353437207037059,1.01091240786658,3.17020642346017,0.421258456238981,0.975267478179181,2.68084838594413,0,0.409499734223957,0.282810863907425,0,0,0,2.19225442626881,0,0,0.405820753925408,0.30982349809975,2.25356482025793,0,0,0.35667105148125,0.354761064070598,0.422215270595328,0.658589785919804,0.75894634753143,0,0.673554789078584,1.34060455107157,0,0.470719003883896,0,0,0.443430153536676,0.459446800413919,0,0,0,0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| ||
|short_description=p2@USP18 | |short_description=p2@USP18 | ||
}} | }} |
Latest revision as of 02:15, 19 September 2015
Short description: | p2@USP18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_USP18_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_017414, uc002zny.2_5end |
EntrezGene: | USP18 |
HGNC: | 12616 |
UniProt: | Q53Y90Q9UMW8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.90e-18 | 253 |
blood vessel endothelial cell | 1.49e-14 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.49e-14 | 18 |
squamous epithelial cell | 1.28e-13 | 63 |
endothelial cell of vascular tree | 4.98e-11 | 24 |
endothelial cell | 3.59e-09 | 36 |
endothelial cell of artery | 1.59e-08 | 9 |
meso-epithelial cell | 9.24e-08 | 45 |
vein endothelial cell | 1.55e-07 | 6 |
lining cell | 9.90e-07 | 58 |
barrier cell | 9.90e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.49e-14 | 18 |
endothelium | 1.49e-14 | 18 |
cardiovascular system endothelium | 1.49e-14 | 18 |
simple squamous epithelium | 1.07e-12 | 22 |
squamous epithelium | 1.82e-10 | 25 |
endothelial tube | 1.59e-08 | 9 |
arterial system endothelium | 1.59e-08 | 9 |
endothelium of artery | 1.59e-08 | 9 |
larynx | 3.29e-08 | 9 |
respiratory primordium | 6.32e-08 | 38 |
endoderm of foregut | 6.32e-08 | 38 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.18e-26 | 143 |
carcinoma | 8.15e-23 | 106 |
cancer | 9.90e-22 | 235 |
disease of cellular proliferation | 1.27e-20 | 239 |