FFCP PHASE1:Hg19::chr17:41064833..41064837,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:41064833..41064837,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr17:41064833..41064837,+ | |description=CAGE_peak_at_chr17:41064833..41064837,+ | ||
|id=chr17:41064833..41064837,+ | |id=chr17:41064833..41064837,+ | ||
|ontology_enrichment_celltype=CL:0000342!1.48e-09!1;CL:0002565!1.48e-09!1;CL:0000181!5.19e-07!12;CL:0000417!5.19e-07!12;CL:0000668!5.19e-07!12;CL:0000414!5.19e-07!12;CL:0000412!5.19e-07!12;CL:0000182!5.19e-07!12 | |ontology_enrichment_celltype=CL:0000342!1.48e-09!1;CL:0002565!1.48e-09!1;CL:0000181!5.19e-07!12;CL:0000417!5.19e-07!12;CL:0000668!5.19e-07!12;CL:0000414!5.19e-07!12;CL:0000412!5.19e-07!12;CL:0000182!5.19e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.95e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.01e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.94e-15;11!UBERON:0009497;3.63e-13;13!UBERON:0003104;5.93e-10;31 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.06e-13!55;UBERON:0005173!1.06e-13!55;UBERON:0002417!3.36e-12!61;UBERON:0000916!3.36e-12!61;UBERON:0009497!6.59e-12!25;UBERON:0000015!6.59e-12!25;UBERON:0002423!6.59e-12!25;UBERON:0006235!6.59e-12!25;UBERON:0004161!6.59e-12!25;UBERON:0005057!2.34e-11!26;UBERON:0002107!2.98e-11!19;UBERON:0006925!2.98e-11!19;UBERON:0008836!2.98e-11!19;UBERON:0008835!1.08e-09!22;UBERON:0003894!1.08e-09!22;UBERON:0002506!1.48e-09!1;UBERON:0001769!1.48e-09!1;UBERON:0009854!2.92e-09!23;UBERON:0007499!1.67e-08!25;UBERON:0009856!3.61e-08!26;UBERON:0005177!1.18e-07!107;UBERON:0009569!3.75e-07!113;UBERON:0002365!8.16e-07!31;UBERON:0002330!8.16e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.89e-24;19!UBERON:0006925;5.89e-24;19!UBERON:0002423;2.96e-18;25!UBERON:0002108;3.35e-15;4!UBERON:0002365;1.01e-14;31!UBERON:0002330;1.01e-14;31!UBERON:0002368;1.80e-12;33!UBERON:0005172;1.43e-09;52!UBERON:0005173;1.43e-09;52!UBERON:0000949;1.08e-08;43!UBERON:0002417;2.04e-07;58!UBERON:0000916;2.04e-07;58!UBERON:0002114;3.06e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.89e-24,19;UBERON:0006925,5.89e-24,19;UBERON:0008836,5.89e-24,19;UBERON:0008835,1.02e-20,22;UBERON:0003894,1.02e-20,22;UBERON:0009854,7.93e-20,23;UBERON:0007499,2.96e-18,25;UBERON:0009497,2.96e-18,25;UBERON:0000015,2.96e-18,25;UBERON:0002423,2.96e-18,25;UBERON:0006235,2.96e-18,25;UBERON:0004161,2.96e-18,25;UBERON:0009856,1.47e-17,26;UBERON:0002108,3.61e-15,4;UBERON:0002365,9.44e-15,31;UBERON:0002330,9.44e-15,31;UBERON:0002368,4.44e-13,35;UBERON:0005172,5.84e-12,54;UBERON:0005173,5.84e-12,54;UBERON:0002417,9.48e-11,60;UBERON:0000916,9.48e-11,60;UBERON:0000949,3.44e-10,45;UBERON:0003929,1.69e-08,54;UBERON:0002530,8.86e-08,59;UBERON:0002114,3.35e-07,2;UBERON:0004921,4.30e-07,118 | |||
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|short_description=p@chr17:41064833..41064837,+ | |short_description=p@chr17:41064833..41064837,+ | ||
}} | }} |
Latest revision as of 17:08, 25 July 2015
Short description: | p@chr17:41064833..41064837, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:41064833..41064837, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.01e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 5.89e-24 | 19 |
digestive gland | 5.89e-24 | 19 |
liver bud | 5.89e-24 | 19 |
hepatic diverticulum | 1.02e-20 | 22 |
liver primordium | 1.02e-20 | 22 |
digestive tract diverticulum | 7.93e-20 | 23 |
epithelial sac | 2.96e-18 | 25 |
epithelium of foregut-midgut junction | 2.96e-18 | 25 |
anatomical boundary | 2.96e-18 | 25 |
hepatobiliary system | 2.96e-18 | 25 |
foregut-midgut junction | 2.96e-18 | 25 |
septum transversum | 2.96e-18 | 25 |
sac | 1.47e-17 | 26 |
small intestine | 3.61e-15 | 4 |
exocrine gland | 9.44e-15 | 31 |
exocrine system | 9.44e-15 | 31 |
endocrine gland | 4.44e-13 | 35 |
abdomen element | 5.84e-12 | 54 |
abdominal segment element | 5.84e-12 | 54 |
abdominal segment of trunk | 9.48e-11 | 60 |
abdomen | 9.48e-11 | 60 |
endocrine system | 3.44e-10 | 45 |
gut epithelium | 1.69e-08 | 54 |
gland | 8.86e-08 | 59 |
duodenum | 3.35e-07 | 2 |
subdivision of digestive tract | 4.30e-07 | 118 |