FFCP PHASE1:Hg19::chr11:915274..915282,-: Difference between revisions
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|id=chr11:915274..915282,-
|short_description=p12@CHID1
|description=CAGE_peak_12_at_CHID1_5end
|association_with_transcript=-216bp_to_ENST00000449825,ENST000005330...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=66005 | |EntrezGene=66005 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28474 | |HGNC=28474 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWS9,E9PRL3 | |UniProt=Q9BWS9,E9PRL3 | ||
|association_with_transcript=-216bp_to_ENST00000449825,ENST00000533056,NM_001142675,uc010qww.1_5end | |||
|cluster_id=chr11:915274..915282,- | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_12_at_CHID1_5end | |||
|id=chr11:915274..915282,- | |||
|ontology_enrichment_celltype=CL:0000453!4.08e-30!5;CL:0000990!7.32e-17!8;CL:0000451!7.75e-14!10;CL:0000181!1.39e-07!12;CL:0000417!1.39e-07!12;CL:0000668!1.39e-07!12;CL:0000414!1.39e-07!12;CL:0000412!1.39e-07!12;CL:0000182!1.39e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.37e-51;5!CL:0000990;4.23e-29;8!CL:0000451;5.65e-24;10!CL:0000182;8.12e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.37e-51,5;CL:0000990,4.23e-29,8;CL:0000451,5.65e-24,10;CL:0000182,7.83e-22,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8552!1.43e-10!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002363!4.75e-10!1;UBERON:0007647!4.75e-10!1;UBERON:0010115!4.75e-10!1;UBERON:0005057!8.28e-09!26;UBERON:0002107!4.45e-08!19;UBERON:0006925!4.45e-08!19;UBERON:0008836!4.45e-08!19;UBERON:0008835!5.43e-07!22;UBERON:0003894!5.43e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.97e-24;19!UBERON:0006925;3.97e-24;19!UBERON:0002423;1.72e-18;25!UBERON:0002365;1.65e-15;31!UBERON:0002330;1.65e-15;31!UBERON:0002368;1.58e-12;33!UBERON:0000949;1.55e-10;43!UBERON:0005172;8.20e-08;52!UBERON:0005173;8.20e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.97e-24,19;UBERON:0006925,3.97e-24,19;UBERON:0008836,3.97e-24,19;UBERON:0008835,6.29e-21,22;UBERON:0003894,6.29e-21,22;UBERON:0009854,4.80e-20,23;UBERON:0007499,1.72e-18,25;UBERON:0009497,1.72e-18,25;UBERON:0000015,1.72e-18,25;UBERON:0002423,1.72e-18,25;UBERON:0006235,1.72e-18,25;UBERON:0004161,1.72e-18,25;UBERON:0009856,8.37e-18,26;UBERON:0002365,5.02e-15,31;UBERON:0002330,5.02e-15,31;UBERON:0002368,2.26e-13,35;UBERON:0000949,1.63e-10,45;UBERON:0003929,7.74e-09,54;UBERON:0005172,7.74e-09,54;UBERON:0005173,7.74e-09,54;UBERON:0002530,3.99e-08,59;UBERON:0002417,5.36e-08,60;UBERON:0000916,5.36e-08,60 | |||
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|short_description=p12@CHID1 | |||
}} | }} |
Latest revision as of 01:21, 25 September 2015
Short description: | p12@CHID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CHID1_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -216bp_to_ENST00000449825, ENST00000533056, NM_001142675, uc010qww.1_5end |
EntrezGene: | CHID1 |
HGNC: | 28474 |
UniProt: | Q9BWS9E9PRL3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.37e-51 | 5 |
conventional dendritic cell | 4.23e-29 | 8 |
dendritic cell | 5.65e-24 | 10 |
hepatocyte | 7.83e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.97e-24 | 19 |
digestive gland | 3.97e-24 | 19 |
liver bud | 3.97e-24 | 19 |
hepatic diverticulum | 6.29e-21 | 22 |
liver primordium | 6.29e-21 | 22 |
digestive tract diverticulum | 4.80e-20 | 23 |
epithelial sac | 1.72e-18 | 25 |
epithelium of foregut-midgut junction | 1.72e-18 | 25 |
anatomical boundary | 1.72e-18 | 25 |
hepatobiliary system | 1.72e-18 | 25 |
foregut-midgut junction | 1.72e-18 | 25 |
septum transversum | 1.72e-18 | 25 |
sac | 8.37e-18 | 26 |
exocrine gland | 5.02e-15 | 31 |
exocrine system | 5.02e-15 | 31 |
endocrine gland | 2.26e-13 | 35 |
endocrine system | 1.63e-10 | 45 |
gut epithelium | 7.74e-09 | 54 |
abdomen element | 7.74e-09 | 54 |
abdominal segment element | 7.74e-09 | 54 |
gland | 3.99e-08 | 59 |
abdominal segment of trunk | 5.36e-08 | 60 |
abdomen | 5.36e-08 | 60 |