FFCP PHASE1:Hg19::chr18:21481109..21481120,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:21481109..21481120,+ | |||
|coexpression_cluster_id=C363 | |||
|description=CAGE_peak_at_chr18:21481109..21481120,+ | |description=CAGE_peak_at_chr18:21481109..21481120,+ | ||
|id=chr18:21481109..21481120,+ | |id=chr18:21481109..21481120,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.28e-29!43;CL:0000223!2.11e-22!59;CL:0000066!1.74e-17!254;CL:0002368!4.62e-13!13;CL:0002541!3.48e-12!3;CL:0002621!3.48e-12!3;CL:0000240!2.40e-10!6;CL:0000311!2.40e-10!6;CL:0000079!2.40e-10!6;CL:0000237!2.40e-10!6;CL:0000036!2.40e-10!6;CL:0000357!2.40e-10!6;CL:0000114!2.40e-10!6;CL:0002159!3.34e-10!13;CL:0002251!5.14e-10!21;CL:0000244!2.37e-09!4;CL:0000731!2.37e-09!4;CL:0000362!9.01e-08!8;CL:0000063!2.37e-07!578;CL:0000312!2.56e-07!5 | |ontology_enrichment_celltype=CL:0002076!1.28e-29!43;CL:0000223!2.11e-22!59;CL:0000066!1.74e-17!254;CL:0002368!4.62e-13!13;CL:0002541!3.48e-12!3;CL:0002621!3.48e-12!3;CL:0000240!2.40e-10!6;CL:0000311!2.40e-10!6;CL:0000079!2.40e-10!6;CL:0000237!2.40e-10!6;CL:0000036!2.40e-10!6;CL:0000357!2.40e-10!6;CL:0000114!2.40e-10!6;CL:0002159!3.34e-10!13;CL:0002251!5.14e-10!21;CL:0000244!2.37e-09!4;CL:0000731!2.37e-09!4;CL:0000362!9.01e-08!8;CL:0000063!2.37e-07!578;CL:0000312!2.56e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.82e-27;3!CL:0002327;1.15e-20;4!CL:0000349;4.58e-10;19!CL:0002166;4.84e-08;3!CL:0002231;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.82e-27,3;CL:0002327,1.90e-20,4;CL:0000349,4.30e-10,19;CL:0002166,5.18e-08,3;CL:0002231,7.26e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.74e-12!14;UBERON:0000158!1.74e-12!14;UBERON:0000476!3.48e-12!3;UBERON:0001949!3.48e-12!3;UBERON:0000920!3.48e-12!3;UBERON:0003124!7.30e-09!7;UBERON:0000365!1.48e-07!5;UBERON:0004119!1.92e-07!169;UBERON:0000925!1.92e-07!169;UBERON:0006595!1.92e-07!169;UBERON:0000478!7.42e-07!24 | |ontology_enrichment_uberon=UBERON:0005631!1.74e-12!14;UBERON:0000158!1.74e-12!14;UBERON:0000476!3.48e-12!3;UBERON:0001949!3.48e-12!3;UBERON:0000920!3.48e-12!3;UBERON:0003124!7.30e-09!7;UBERON:0000365!1.48e-07!5;UBERON:0004119!1.92e-07!169;UBERON:0000925!1.92e-07!169;UBERON:0006595!1.92e-07!169;UBERON:0000478!7.42e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.82e-27;3!UBERON:0000920;1.82e-27;3!UBERON:0001911;1.15e-20;4!UBERON:0005631;1.63e-18;10!UBERON:0000158;1.63e-18;10!UBERON:0000478;4.31e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.82e-27,3;UBERON:0001911,1.90e-20,4;UBERON:0005333,1.90e-20,4;UBERON:0008425,1.90e-20,4;UBERON:0005311,1.90e-20,4;UBERON:0005631,1.82e-13,14;UBERON:0000158,1.82e-13,14;UBERON:0003124,2.24e-12,7;UBERON:0000076,9.82e-11,8;UBERON:0000478,4.10e-08,24 | |||
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|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.545492241181669,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,1.80952150340936,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.02367830757947,0.850650583454319,1.07470227243418,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0.552485933615378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.576570202095319,0.127612712494584,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,3.36942951335251,0.443430153536676,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,0.614321404198464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5950057986596,0.0915975934018623,3.19820865611181,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0.184105950251841,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,1.60374807980835,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:21481109..21481120,+ | |short_description=p@chr18:21481109..21481120,+ | ||
}} | }} |
Latest revision as of 00:00, 26 July 2015
Short description: | p@chr18:21481109..21481120, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:21481109..21481120, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.82e-27 | 3 |
mammary gland epithelial cell | 1.90e-20 | 4 |
extraembryonic cell | 4.30e-10 | 19 |
epithelial cell of Malassez | 5.18e-08 | 3 |
epithelial cell of prostate | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.82e-27 | 3 |
mammary gland | 1.90e-20 | 4 |
mammary bud | 1.90e-20 | 4 |
mammary ridge | 1.90e-20 | 4 |
mammary placode | 1.90e-20 | 4 |
extraembryonic membrane | 1.82e-13 | 14 |
membranous layer | 1.82e-13 | 14 |
chorion | 2.24e-12 | 7 |
external ectoderm | 9.82e-11 | 8 |
extraembryonic structure | 4.10e-08 | 24 |