FFCP PHASE1:Hg19::chr18:52274330..52274344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:52274330..52274344,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_at_chr18:52274330..52274344,- | |description=CAGE_peak_at_chr18:52274330..52274344,- | ||
|id=chr18:52274330..52274344,- | |id=chr18:52274330..52274344,- | ||
|ontology_enrichment_celltype=CL:0002322!9.51e-07!5 | |ontology_enrichment_celltype=CL:0002322!9.51e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.63e-12;1!CL:0000159;8.93e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.63e-12,1;CL:0000159,8.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.32e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;2.63e-12;1!DOID:4362;3.10e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.63e-12,1;DOID:4362,3.17e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0000344!4.55e-10!12;UBERON:0003127!5.16e-09!2;UBERON:0000341!7.58e-09!2;UBERON:0003350!6.28e-07!5 | |ontology_enrichment_uberon=UBERON:0000344!4.55e-10!12;UBERON:0003127!5.16e-09!2;UBERON:0000341!7.58e-09!2;UBERON:0003350!6.28e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.00e-22;2!UBERON:0000341;1.20e-21;2!UBERON:0000160;1.09e-20;17!UBERON:0002108;7.40e-20;4!UBERON:0005409;4.03e-16;22!UBERON:0004921;2.89e-13;33!UBERON:0004911;2.63e-12;1!UBERON:0000002;7.72e-08;6!UBERON:0000974;7.72e-08;6!UBERON:0001560;7.72e-08;6!UBERON:0003126;5.26e-07;7!UBERON:0001005;5.26e-07;7!UBERON:0004909;8.93e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.17e-22,2;UBERON:0000341,9.19e-22,2;UBERON:0000160,9.52e-21,17;UBERON:0002108,7.41e-20,4;UBERON:0005409,2.92e-14,25;UBERON:0004911,2.63e-12,1;UBERON:0000002,7.85e-08,6;UBERON:0001560,7.85e-08,6;UBERON:0004921,1.97e-07,118;UBERON:0003126,5.34e-07,7;UBERON:0001005,5.34e-07,7;UBERON:0004909,8.93e-07,2 | |||
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| ||
|short_description=p@chr18:52274330..52274344,- | |short_description=p@chr18:52274330..52274344,- | ||
}} | }} |
Latest revision as of 01:20, 26 July 2015
Short description: | p@chr18:52274330..52274344, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:52274330..52274344, - |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.63e-12 | 1 |
seromucus secreting cell | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.17e-22 | 2 |
throat | 9.19e-22 | 2 |
intestine | 9.52e-21 | 17 |
small intestine | 7.41e-20 | 4 |
gastrointestinal system | 2.92e-14 | 25 |
epithelium of female gonad | 2.63e-12 | 1 |
uterine cervix | 7.85e-08 | 6 |
neck of organ | 7.85e-08 | 6 |
subdivision of digestive tract | 1.97e-07 | 118 |
trachea | 5.34e-07 | 7 |
respiratory airway | 5.34e-07 | 7 |
epithelium of gonad | 8.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.63e-12 | 1 |
cervical cancer | 3.17e-09 | 5 |