FFCP PHASE1:Hg19::chr2:219134343..219134365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=14 | |EntrezGene=14 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18 | |HGNC=18 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_uc002vhj.2_5end | |association_with_transcript=26bp_to_uc002vhj.2_5end | ||
|cluster_id=chr2:219134343..219134365,- | |||
|description=CAGE_peak_4_at_AAMP_5end | |description=CAGE_peak_4_at_AAMP_5end | ||
|id=chr2:219134343..219134365,- | |id=chr2:219134343..219134365,- | ||
|ontology_enrichment_celltype=CL:0000066!1.01e-07!254;CL:0002321!3.40e-07!248;CL:0002078!4.16e-07!44 | |ontology_enrichment_celltype=CL:0000066!1.01e-07!254;CL:0002321!3.40e-07!248;CL:0002078!4.16e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002253;1.84e-10;2!CL:0002322;1.63e-09;5!CL:0000540;4.92e-08;6!CL:0000404;4.92e-08;6!CL:1000449;5.83e-08;15!CL:1000497;5.46e-07;17!CL:0002518;5.46e-07;17!CL:1000746;5.67e-07;7!CL:1000612;5.67e-07;7!CL:0000182;5.89e-07;12!CL:0002681;9.86e-07;12!CL:0002584;9.86e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,3.80e-10,2;CL:0002322,1.59e-09,5;CL:1000449,4.66e-08,15;CL:0000540,4.76e-08,6;CL:0000031,4.76e-08,6;CL:0000404,4.76e-08,6;CL:1000497,4.50e-07,17;CL:0002518,4.50e-07,17;CL:0000182,5.95e-07,12;CL:1000746,6.30e-07,7;CL:1000612,6.30e-07,7;CL:0002681,8.89e-07,12;CL:0002584,8.89e-07,12 | |||
|ontology_enrichment_development_v019=CL:0000031;4.92e-08;6!UBERON:0004161;1.37e-07;11!UBERON:0003104;5.60e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.83e-08;15!UBERON:0004819;5.83e-08;15!UBERON:0001285;5.83e-08;15!UBERON:0007684;5.83e-08;15!UBERON:0000074;5.67e-07;7!UBERON:0001229;5.67e-07;7!UBERON:0002113;9.73e-07;24!UBERON:0011143;9.73e-07;24!UBERON:0001225;9.86e-07;12!UBERON:0008987;9.86e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,5.23e-09,54;UBERON:0005173,5.23e-09,54;UBERON:0004211,4.66e-08,15;UBERON:0009773,4.66e-08,15;UBERON:0001231,4.66e-08,15;UBERON:0001285,4.66e-08,15;UBERON:0007684,4.66e-08,15;UBERON:0004208,4.66e-08,15;UBERON:0002417,6.80e-08,60;UBERON:0000916,6.80e-08,60;UBERON:0006555,1.55e-07,16;UBERON:0004819,1.55e-07,16;UBERON:0010532,6.30e-07,7;UBERON:0000074,6.30e-07,7;UBERON:0001229,6.30e-07,7;UBERON:0001230,6.30e-07,7;UBERON:0003220,6.30e-07,7;UBERON:0005749,6.30e-07,7;UBERON:0004199,6.30e-07,7;UBERON:0004209,6.30e-07,7;UBERON:0004198,6.30e-07,7;UBERON:0001225,8.89e-07,12;UBERON:0008987,8.89e-07,12 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0.61560529038394,0.408001382488506,0,0,0.410623275218653,0.251085279189606,0.305653622991805,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.378139268656271,0.443458794925128,0,0,0.364295288292542,0.370784442784429,0,0.348259474598534,0.132957960518865,0,0,0,0.993812036833525,0.860234595106124,0,1.13061588384802,0,0.825354125820202,0.417989933073621,0.258416759169329,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0,0.0892997282840798,0.898117490504679,0.225222960966644,1.53316637465883,0.949265659568129,0.366403487860815,0,0,0,0,0.379891534993739,0,0,0.709336764396714,1.12135520028461,0,0,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,1.1409436430889,0.448346041655403,0.117434498643765,0,0.280901613404497,0,0.368502951935304,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0.201504196455281,0.169560592310488,0.193260853163297,0,0,2.6834215348511,2.25300606146525,0.929551542956147,0.518305275076852,1.26160425437814,4.74470566798579,0,0,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0.220587945464788,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,0,0.343135620597051,0,0,0,0.0925884451585296,0,0,1.44331342025273,0.115930404975077,0,0.144366447761074,0,0.380508304469197,0,0,0.246217006087397,0.702012795417713,0.148631162288728,0,0.16798212819886,0.141775097242386,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0.129271715757778,3.57656445851882,1.690605505112,0.26593811658487,0,0.514414748524284,0,0.532844358032199,0.285955987316295,0,1.64648067356154,0,0,0.791951872933429,0,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.686286847621712,0,0,0,0,0,0,0,0,0.280660094433074,0,0,0.160853921143607,0,0.925258162815933,0.532685175939381,0.164254312027618,0,0.232420756919918,0.362578348774867,0,0,0.459257792658427,0,0,0,0.15403067420883,0.784349769176855,1.46139224653261,0.211103257785751,1.13733384070897,0.340187410553031,0.431831832204279,3.08454505380579,0,3.01013864312912,0.509752546090077,1.66215201785745,0.671624264166535,0,0,0.256450125116389,0.656029291399411,1.30151357865721,0,0.54941678891006,0.742585499285292,0,0,0,0.193341436584244,0.462145851343933,0.307007349452259,1.24052915236078,0.214840489736547,0.435050081742686,0.170453254832202,0,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0.316379424718726,0.190630193923825,0.255897791311334,0,0,0.78494864019923,0.359744915166629,0.54907405947211,0.235624804691373,0,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,1.13841952129715,0.699869440489966,0,0,1.08890984861323,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0.144269212976445,0,0.159426272728822,0,0.191505370132367,0.423347165447766,0.649243880549111,0.561594356226918,0.228234679033192,0.156679895773023,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0,0,0.835218521685727,0,0,0.66614393599564,1.4098700508785,0,0,0.121360521749513,0,0.284136146806413,0,0,0,0,0.140669416410513,0.111308705022906,0.16480387422676,0.844501632511974,0,0.276283915531148,1.0077309914171,0.409074730008619,0.123084805461069,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0.520874984799877,0,0,0,0,0,0.438770794307945,0.10893846351899,0,0,0,0,0.179515288819544,0.217294743844016,0,0,0,0,0,0,0,0.784250137270958,0.167821586975843,0.75901493089674,0,0.421996129056054,0,1.13082457147153,1.08194319871046,0,0.0884575645033392,0,0,0.494255755786011,0.313265848516366,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0.30607276163049,0.063186579628488,1.80388103297391,0.518440956986236,0,0.330991955875499,0,0,1.99226682220855,0,0,0,0.0870592065804026,0.17472666824203,0.171986032471617,0.0967563312890851,0,0.164230914106418,0,0.264768380074501,0,0,0.19871461170299,0.126621591911757,0.195551382734803,0,0.213452994739353,0.19980960958213,0.144090417154106,0.572682980829578,0.686379991447858,0,0,0,0.271808412147228,0.313808538937,0.101998217636322,0.288950589901519,0,0,0,0.429765441419957,0.262887354279314,0,0,0.717873024576814,0.199679000498991,0,0,0.0671834724867263,0,1.16495949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| ||
|short_description=p4@AAMP | |short_description=p4@AAMP | ||
}} | }} |
Latest revision as of 16:17, 24 September 2015
Short description: | p4@AAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AAMP_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_uc002vhj.2_5end |
EntrezGene: | AAMP |
HGNC: | 18 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 3.80e-10 | 2 |
embryonic stem cell | 1.59e-09 | 5 |
epithelial cell of nephron | 4.66e-08 | 15 |
neuron | 4.76e-08 | 6 |
neuroblast | 4.76e-08 | 6 |
electrically signaling cell | 4.76e-08 | 6 |
kidney cell | 4.50e-07 | 17 |
kidney epithelial cell | 4.50e-07 | 17 |
hepatocyte | 5.95e-07 | 12 |
glomerular cell | 6.30e-07 | 7 |
kidney corpuscule cell | 6.30e-07 | 7 |
kidney cortical cell | 8.89e-07 | 12 |
renal cortical epithelial cell | 8.89e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
abdomen element | 5.23e-09 | 54 |
abdominal segment element | 5.23e-09 | 54 |
nephron epithelium | 4.66e-08 | 15 |
renal tubule | 4.66e-08 | 15 |
nephron tubule | 4.66e-08 | 15 |
nephron | 4.66e-08 | 15 |
uriniferous tubule | 4.66e-08 | 15 |
nephrogenic mesenchyme | 4.66e-08 | 15 |
abdominal segment of trunk | 6.80e-08 | 60 |
abdomen | 6.80e-08 | 60 |
excretory tube | 1.55e-07 | 16 |
kidney epithelium | 1.55e-07 | 16 |
primitive nephron | 6.30e-07 | 7 |
renal glomerulus | 6.30e-07 | 7 |
renal corpuscle | 6.30e-07 | 7 |
glomerular capsule | 6.30e-07 | 7 |
metanephric mesenchyme | 6.30e-07 | 7 |
glomerular tuft | 6.30e-07 | 7 |
S-shaped body | 6.30e-07 | 7 |
renal vesicle | 6.30e-07 | 7 |
comma-shaped body | 6.30e-07 | 7 |
cortex of kidney | 8.89e-07 | 12 |
renal parenchyma | 8.89e-07 | 12 |