FFCP PHASE1:Hg19::chr2:230804505..230804520,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:230804505..230804520,- | |||
|description=CAGE_peak_at_chr2:230804505..230804520,- | |description=CAGE_peak_at_chr2:230804505..230804520,- | ||
|id=chr2:230804505..230804520,- | |id=chr2:230804505..230804520,- | ||
|ontology_enrichment_celltype=CL:0000039!4.70e-51!7;CL:0000586!4.70e-51!7 | |ontology_enrichment_celltype=CL:0000039!4.70e-51!7;CL:0000586!4.70e-51!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.50e-87;7!CL:0000586;1.50e-87;7!CL:0000083;1.54e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.25e-87,7;CL:0000586,1.25e-87,7;CL:0000083,1.49e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0003124;8.64e-26;1!UBERON:0009117;6.92e-23;10!UBERON:0005564;6.92e-23;10 | |||
|ontology_enrichment_disease=DOID:3095!2.71e-23!22;DOID:2994!2.71e-23!22;DOID:1799!7.46e-16!1;DOID:10165!7.46e-16!1;DOID:1798!7.46e-16!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.00e-40;22!DOID:2994;2.00e-40;22!DOID:1799;4.06e-26;1!DOID:10165;4.06e-26;1!DOID:1798;4.06e-26;1!DOID:1793;1.54e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.87e-40,22;DOID:2994,1.87e-40,22;DOID:1799,3.58e-26,1;DOID:10165,3.58e-26,1;DOID:1798,3.58e-26,1;DOID:0050687,1.64e-08,143;DOID:1793,1.49e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.35e-44!8;UBERON:0003135!2.56e-32!11;UBERON:0000991!5.50e-17!21;UBERON:0009196!5.50e-17!21;UBERON:0009117!5.50e-17!21;UBERON:0005564!5.50e-17!21;UBERON:0004176!3.23e-16!22;UBERON:0003101!3.23e-16!22;UBERON:0000079!3.23e-16!22;UBERON:0002323!6.16e-11!46;UBERON:0003133!1.97e-10!48;UBERON:0004458!3.00e-10!49;UBERON:0003124!5.82e-09!7;UBERON:0005156!1.98e-08!59;UBERON:0000990!1.98e-08!59;UBERON:0003886!6.66e-08!63;UBERON:0002553!4.44e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.17e-28;8!UBERON:0003135;7.00e-21;11!UBERON:0000991;2.70e-11;21!UBERON:0003101;8.20e-11;22!UBERON:0000079;8.20e-11;22!UBERON:0002323;8.16e-08;45!UBERON:0001987;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.97e-28,8;UBERON:0003135,6.54e-21,11;UBERON:0000991,2.61e-11,21;UBERON:0009196,2.61e-11,21;UBERON:0009117,2.61e-11,21;UBERON:0005564,2.61e-11,21;UBERON:0004176,7.93e-11,22;UBERON:0003101,7.93e-11,22;UBERON:0000079,7.93e-11,22;UBERON:0002323,4.51e-09,46;UBERON:0003133,1.15e-08,48;UBERON:0004458,1.54e-08,49;UBERON:0003886,8.77e-08,54;UBERON:0001987,2.04e-07,4;UBERON:0004340,2.04e-07,4;UBERON:0005156,4.06e-07,59;UBERON:0000990,4.06e-07,59;UBERON:0002553,6.26e-07,61 | |||
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|short_description=p@chr2:230804505..230804520,- | |short_description=p@chr2:230804505..230804520,- | ||
}} | }} |
Latest revision as of 07:30, 29 July 2015
Short description: | p@chr2:230804505..230804520, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:230804505..230804520, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.25e-87 | 7 |
germ cell | 1.25e-87 | 7 |
epithelial cell of pancreas | 1.49e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
testis | 1.97e-28 | 8 |
male reproductive organ | 6.54e-21 | 11 |
gonad | 2.61e-11 | 21 |
indifferent external genitalia | 2.61e-11 | 21 |
indifferent gonad | 2.61e-11 | 21 |
gonad primordium | 2.61e-11 | 21 |
external genitalia | 7.93e-11 | 22 |
male organism | 7.93e-11 | 22 |
male reproductive system | 7.93e-11 | 22 |
body cavity | 4.51e-09 | 46 |
reproductive organ | 1.15e-08 | 48 |
body cavity or lining | 1.54e-08 | 49 |
body cavity precursor | 8.77e-08 | 54 |
placenta | 2.04e-07 | 4 |
allantois | 2.04e-07 | 4 |
reproductive structure | 4.06e-07 | 59 |
reproductive system | 4.06e-07 | 59 |
anatomical cavity | 6.26e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.87e-40 | 22 |
germ cell cancer | 1.87e-40 | 22 |
islet cell tumor | 3.58e-26 | 1 |
endocrine pancreas cancer | 3.58e-26 | 1 |
pancreatic endocrine carcinoma | 3.58e-26 | 1 |
cell type cancer | 1.64e-08 | 143 |
pancreatic cancer | 1.49e-07 | 4 |