FFCP PHASE1:Hg19::chr12:111512612..111512627,+: Difference between revisions
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|id=chr12:111512612..111512627,+
|short_description=p@chr12:111512612..111512627,+
|description=CAGE_peak_at_chr12:111512612..111512627,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:111512612..111512627,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr12:111512612..111512627,+ | |||
|id=chr12:111512612..111512627,+ | |||
|ontology_enrichment_celltype=CL:0000181!4.18e-13!12;CL:0000417!4.18e-13!12;CL:0000668!4.18e-13!12;CL:0000414!4.18e-13!12;CL:0000412!4.18e-13!12;CL:0000182!4.18e-13!12;CL:0002623!9.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.94e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.08e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.30e-13;11!UBERON:0009497;4.26e-11;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!6.78e-22!19;UBERON:0006925!6.78e-22!19;UBERON:0008836!6.78e-22!19;UBERON:0002365!4.66e-19!31;UBERON:0002330!4.66e-19!31;UBERON:0008835!6.24e-19!22;UBERON:0003894!6.24e-19!22;UBERON:0009854!4.09e-18!23;UBERON:0002336!1.44e-17!1;UBERON:0001018!1.44e-17!1;UBERON:0002473!1.44e-17!1;UBERON:0005340!1.44e-17!1;UBERON:0002316!1.44e-17!1;UBERON:0003544!1.44e-17!1;UBERON:0001020!1.44e-17!1;UBERON:0005970!1.44e-17!1;UBERON:0002437!1.44e-17!1;UBERON:0007499!1.12e-16!25;UBERON:0009497!1.12e-16!25;UBERON:0000015!1.12e-16!25;UBERON:0002423!1.12e-16!25;UBERON:0006235!1.12e-16!25;UBERON:0004161!1.12e-16!25;UBERON:0005057!4.87e-16!26;UBERON:0009856!4.87e-16!26;UBERON:0002530!2.22e-13!59;UBERON:0002368!6.18e-12!35;UBERON:0003929!6.83e-11!54;UBERON:0005172!1.19e-10!55;UBERON:0005173!1.19e-10!55;UBERON:0002417!1.39e-09!61;UBERON:0000916!1.39e-09!61;UBERON:0005162!1.86e-09!2;UBERON:0000122!1.86e-09!2;UBERON:0000949!2.73e-09!45;UBERON:0005911!4.33e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.79e-28;19!UBERON:0006925;3.79e-28;19!UBERON:0002423;1.42e-21;25!UBERON:0002365;2.37e-17;31!UBERON:0002330;2.37e-17;31!UBERON:0002368;1.40e-14;33!UBERON:0000949;5.68e-11;43!UBERON:0005172;6.84e-08;52!UBERON:0005173;6.84e-08;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.07e-28,19;UBERON:0006925,4.07e-28,19;UBERON:0008836,4.07e-28,19;UBERON:0008835,2.18e-24,22;UBERON:0003894,2.18e-24,22;UBERON:0009854,2.32e-23,23;UBERON:0007499,1.50e-21,25;UBERON:0009497,1.50e-21,25;UBERON:0000015,1.50e-21,25;UBERON:0002423,1.50e-21,25;UBERON:0006235,1.50e-21,25;UBERON:0004161,1.50e-21,25;UBERON:0009856,9.49e-21,26;UBERON:0002365,1.63e-17,31;UBERON:0002330,1.63e-17,31;UBERON:0002368,1.37e-15,35;UBERON:0000949,2.91e-12,45;UBERON:0003929,2.58e-10,54;UBERON:0005172,2.58e-10,54;UBERON:0005173,2.58e-10,54;UBERON:0002530,1.74e-09,59;UBERON:0002417,2.45e-09,60;UBERON:0000916,2.45e-09,60;UBERON:0005911,5.81e-07,82 | |||
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|short_description=p@chr12:111512612..111512627,+ | |||
}} | }} |
Latest revision as of 04:59, 24 July 2015
Short description: | p@chr12:111512612..111512627, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:111512612..111512627, + |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.08e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.07e-28 | 19 |
digestive gland | 4.07e-28 | 19 |
liver bud | 4.07e-28 | 19 |
hepatic diverticulum | 2.18e-24 | 22 |
liver primordium | 2.18e-24 | 22 |
digestive tract diverticulum | 2.32e-23 | 23 |
epithelial sac | 1.50e-21 | 25 |
epithelium of foregut-midgut junction | 1.50e-21 | 25 |
anatomical boundary | 1.50e-21 | 25 |
hepatobiliary system | 1.50e-21 | 25 |
foregut-midgut junction | 1.50e-21 | 25 |
septum transversum | 1.50e-21 | 25 |
sac | 9.49e-21 | 26 |
exocrine gland | 1.63e-17 | 31 |
exocrine system | 1.63e-17 | 31 |
endocrine gland | 1.37e-15 | 35 |
endocrine system | 2.91e-12 | 45 |
gut epithelium | 2.58e-10 | 54 |
abdomen element | 2.58e-10 | 54 |
abdominal segment element | 2.58e-10 | 54 |
gland | 1.74e-09 | 59 |
abdominal segment of trunk | 2.45e-09 | 60 |
abdomen | 2.45e-09 | 60 |
endo-epithelium | 5.81e-07 | 82 |