FFCP PHASE1:Hg19::chr19:13743837..13743844,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:13743837..13743844,- | |||
|coexpression_cluster_id=C740 | |||
|description=CAGE_peak_at_chr19:13743837..13743844,- | |description=CAGE_peak_at_chr19:13743837..13743844,- | ||
|id=chr19:13743837..13743844,- | |id=chr19:13743837..13743844,- | ||
|ontology_enrichment_celltype=CL:0000242!9.87e-16!2;CL:0000148!2.81e-12!10;CL:0000541!2.81e-12!10;CL:0002567!3.62e-11!3;CL:0000167!6.16e-09!1;CL:0000164!6.16e-09!1;CL:0000502!6.16e-09!1;CL:0000172!6.16e-09!1;CL:0000173!6.16e-09!1;CL:0002351!6.16e-09!1;CL:0002566!7.18e-09!1;CL:0000147!8.27e-09!14;CL:0000333!1.08e-07!41;CL:0002077!1.14e-07!33;CL:0000312!8.17e-07!5 | |ontology_enrichment_celltype=CL:0000242!9.87e-16!2;CL:0000148!2.81e-12!10;CL:0000541!2.81e-12!10;CL:0002567!3.62e-11!3;CL:0000167!6.16e-09!1;CL:0000164!6.16e-09!1;CL:0000502!6.16e-09!1;CL:0000172!6.16e-09!1;CL:0000173!6.16e-09!1;CL:0002351!6.16e-09!1;CL:0002566!7.18e-09!1;CL:0000147!8.27e-09!14;CL:0000333!1.08e-07!41;CL:0002077!1.14e-07!33;CL:0000312!8.17e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.09e-10;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,9.90e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3119!5.47e-09!14;DOID:4430!6.16e-09!1 | |ontology_enrichment_disease=DOID:3119!5.47e-09!14;DOID:4430!6.16e-09!1 | ||
|ontology_enrichment_disease_v019=DOID:3119;3.57e-09;14!DOID:5409;2.03e-08;4!DOID:4362;5.54e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,3.58e-09,14;DOID:5409,2.11e-08,4;DOID:4362,5.38e-07,5 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;2.43e-08;4!UBERON:0000923;2.43e-08;4!UBERON:0010316;2.43e-08;4!UBERON:0005291;2.43e-08;4!UBERON:0002050;6.39e-07;5!UBERON:0005423;6.39e-07;5 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr19:13743837..13743844,- | |short_description=p@chr19:13743837..13743844,- | ||
}} | }} |
Latest revision as of 04:07, 26 July 2015
Short description: | p@chr19:13743837..13743844, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:13743837..13743844, - |
Coexpression cluster: | C740_gastrointestinal_smallcell_small_nonsmall_neuroblastoma_temporal_somatostatinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 3.58e-09 | 14 |
lung small cell carcinoma | 2.11e-08 | 4 |
cervical cancer | 5.38e-07 | 5 |