FFCP PHASE1:Hg19::chr19:17462845..17462854,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83483 | |EntrezGene=83483 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=13635 | |HGNC=13635 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=166bp_to_D83199_5end | |association_with_transcript=166bp_to_D83199_5end | ||
|cluster_id=chr19:17462845..17462854,- | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_16_at_PLVAP_5end | |description=CAGE_peak_16_at_PLVAP_5end | ||
|id=chr19:17462845..17462854,- | |id=chr19:17462845..17462854,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.40e-14;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.94e-25!115;UBERON:0002133!6.41e-11!2;UBERON:0002950!1.92e-10!2;UBERON:0001891!1.92e-10!2;UBERON:0009616!1.92e-10!2;UBERON:0003978!1.52e-07!3;UBERON:0009751!1.52e-07!3;UBERON:0000946!1.52e-07!3;UBERON:0002523!1.52e-07!3;UBERON:0005983!1.52e-07!3;UBERON:0002165!1.52e-07!3;UBERON:0002062!1.52e-07!3;UBERON:0007280!1.52e-07!3;UBERON:0002106!2.44e-07!3;UBERON:0004854!2.44e-07!3;UBERON:0009034!2.44e-07!3;UBERON:0002095!2.44e-07!3;UBERON:0004782!2.44e-07!3;UBERON:0003281!2.44e-07!3;UBERON:0009664!2.44e-07!3;UBERON:0002296!2.44e-07!3;UBERON:0005602!2.44e-07!3;UBERON:0001179!2.44e-07!3;UBERON:0006293!2.44e-07!3;UBERON:0003103!3.58e-07!69 | |ontology_enrichment_uberon=UBERON:0007023!7.94e-25!115;UBERON:0002133!6.41e-11!2;UBERON:0002950!1.92e-10!2;UBERON:0001891!1.92e-10!2;UBERON:0009616!1.92e-10!2;UBERON:0003978!1.52e-07!3;UBERON:0009751!1.52e-07!3;UBERON:0000946!1.52e-07!3;UBERON:0002523!1.52e-07!3;UBERON:0005983!1.52e-07!3;UBERON:0002165!1.52e-07!3;UBERON:0002062!1.52e-07!3;UBERON:0007280!1.52e-07!3;UBERON:0002106!2.44e-07!3;UBERON:0004854!2.44e-07!3;UBERON:0009034!2.44e-07!3;UBERON:0002095!2.44e-07!3;UBERON:0004782!2.44e-07!3;UBERON:0003281!2.44e-07!3;UBERON:0009664!2.44e-07!3;UBERON:0002296!2.44e-07!3;UBERON:0005602!2.44e-07!3;UBERON:0001179!2.44e-07!3;UBERON:0006293!2.44e-07!3;UBERON:0003103!3.58e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;5.96e-34;2!UBERON:0002114;3.66e-23;2!UBERON:0002046;1.40e-14;5!UBERON:0002108;1.71e-14;4!UBERON:0000974;2.59e-12;6!UBERON:0000922;2.51e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,5.04e-34,2;UBERON:0002114,4.09e-23,2;UBERON:0002046,1.40e-14,5;UBERON:0004117,1.40e-14,5;UBERON:0007689,1.40e-14,5;UBERON:0007123,1.40e-14,5;UBERON:0003091,1.40e-14,5;UBERON:0002108,1.83e-14,4;UBERON:0000974,6.13e-08,10;UBERON:0009722,2.32e-07,11;UBERON:0007690,2.32e-07,11 | |||
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| ||
|short_description=p16@PLVAP | |short_description=p16@PLVAP | ||
}} | }} |
Latest revision as of 11:49, 16 September 2015
Short description: | p16@PLVAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_PLVAP_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 166bp_to_D83199_5end |
EntrezGene: | PLVAP |
HGNC: | 13635 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 5.04e-34 | 2 |
duodenum | 4.09e-23 | 2 |
thyroid gland | 1.40e-14 | 5 |
pharyngeal pouch | 1.40e-14 | 5 |
thyroid diverticulum | 1.40e-14 | 5 |
pharyngeal pouch 2 | 1.40e-14 | 5 |
thyroid primordium | 1.40e-14 | 5 |
small intestine | 1.83e-14 | 4 |
neck | 6.13e-08 | 10 |
entire pharyngeal arch endoderm | 2.32e-07 | 11 |
early pharyngeal endoderm | 2.32e-07 | 11 |