FFCP PHASE1:Hg19::chr3:124829429..124829456,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84561 | |EntrezGene=84561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15595 | |HGNC=15595 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_ENST00000479231_5end | |association_with_transcript=105bp_to_ENST00000479231_5end | ||
|cluster_id=chr3:124829429..124829456,- | |||
|coexpression_cluster_id=C4277 | |||
|description=CAGE_peak_1_at_SLC12A8_5end | |description=CAGE_peak_1_at_SLC12A8_5end | ||
|id=chr3:124829429..124829456,- | |id=chr3:124829429..124829456,- | ||
|ontology_enrichment_celltype=CL:0000055!1.67e-25!180;CL:0000144!2.19e-21!625;CL:0000057!8.29e-21!75;CL:0000548!3.38e-19!679;CL:0000004!3.38e-19!679;CL:0000255!3.38e-19!679;CL:0000012!1.24e-18!682;CL:0002371!2.21e-17!591;CL:0000048!6.75e-15!430;CL:0000723!4.45e-14!436;CL:0000034!1.06e-12!444;CL:0000003!5.13e-12!722;CL:0002320!1.77e-11!365;CL:0000219!8.71e-10!390;CL:0000134!1.22e-09!358;CL:0000077!8.96e-08!19;CL:0000183!2.10e-07!59;CL:0000680!6.25e-07!57;CL:0000056!6.25e-07!57;CL:0000355!6.25e-07!57;CL:0000063!8.64e-07!578 | |ontology_enrichment_celltype=CL:0000055!1.67e-25!180;CL:0000144!2.19e-21!625;CL:0000057!8.29e-21!75;CL:0000548!3.38e-19!679;CL:0000004!3.38e-19!679;CL:0000255!3.38e-19!679;CL:0000012!1.24e-18!682;CL:0002371!2.21e-17!591;CL:0000048!6.75e-15!430;CL:0000723!4.45e-14!436;CL:0000034!1.06e-12!444;CL:0000003!5.13e-12!722;CL:0002320!1.77e-11!365;CL:0000219!8.71e-10!390;CL:0000134!1.22e-09!358;CL:0000077!8.96e-08!19;CL:0000183!2.10e-07!59;CL:0000680!6.25e-07!57;CL:0000056!6.25e-07!57;CL:0000355!6.25e-07!57;CL:0000063!8.64e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000134;8.81e-07;55!CL:0000077;9.41e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.71e-16,76;CL:0000048,7.50e-09,427;CL:0000723,2.71e-08,433;CL:0002320,7.18e-08,361;CL:0000034,1.38e-07,441;CL:0000219,3.86e-07,386;CL:0000077,7.83e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!6.16e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;9.95e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.21e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.04e-11!375;UBERON:0000914!2.87e-08!83;UBERON:0002329!2.87e-08!83;UBERON:0003077!2.87e-08!83;UBERON:0003059!2.87e-08!83;UBERON:0007282!2.87e-08!83;UBERON:0009618!2.87e-08!83;UBERON:0007285!2.87e-08!83;UBERON:0002200!3.06e-07!11;UBERON:0006876!3.06e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;1.72e-07;14!UBERON:0006876;3.40e-07;11!UBERON:0002203;8.41e-07;6!UBERON:0001768;8.41e-07;6!UBERON:0002200;8.41e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.61e-08,371;UBERON:0001801,2.17e-07,14;UBERON:0006876,2.61e-07,11;UBERON:0002203,7.43e-07,6;UBERON:0001768,7.43e-07,6;UBERON:0002200,7.43e-07,6 | |||
|phase1_expression=1.2717486548939,0.428201047781966,2.53717927372748,0,2.68176656656373,5.23403114460221,5.06599756336621,0.631719873426831,0.522371256399677,0.491467873003018,0,1.31064823278103,2.37390280405608,5.321953177282,3.97676850873499,0,0,0,0.975865597581014,5.66356867153224,3.26401105990805,5.01527554364941,1.43117993565528,0.273748850145768,0.251085279189606,0.0764134057479513,0.328402357799783,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223915474239924,0,0.257575567634187,0.145398238779565,1.88937971844405,0.242584061187816,0.232429036905685,0.822335776043652,0.619412741790207,0.863077176966451,1.7931249457037,0.47296445977717,0,0,0,0.376484679085209,0.818718450173537,0.449446968890169,0,0.641858054152187,0,0.659702600373432,2.79249120670285,3.40979800426155,0,0,0,0.502497330513487,2.60741459210101,1.08594422352558,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,12.7433163343691,5.37022759742827,0.361439152384566,0,0.579386075843295,0.795285947051099,0,2.74150969775797,7.53879951372717,7.81729592668822,0.130979075497713,0.364295288292542,1.11235332835329,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,33.7940927152817,3.92554586160197,14.1677823470144,18.3575437279241,6.73869926176878,7.8494864019923,0,13.3200476145266,4.04574346019696,0.538842688278752,0.817309515567294,0.605429710579726,1.72852777344,2.10889288650417,0,0,0.149448680551801,0.352303495931295,0.161872944368132,0.140450806702248,2.24569588380383,2.7023549808589,2.58314452939414,1.18800285728205,2.96720315134268,7.28129089550421,26.5888712472008,1.0100166837244,2.25213335769535,1.93944880838928,6.14568669233173,2.14541457059314,0.600952235626387,1.24775401476023,1.25572744982203,1.92201649936711,1.05965950579781,1.20036438433761,1.03052529238439,1.03056216018252,2.79175284497385,0.337552664482532,0.292311015483596,0.757301322732344,0.736399189138395,8.89053312503465,0,0.503760491138201,1.69560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,1.38134921352481,4.64367928031979,2.88751792667834,0.354920400119532,0.337169380156203,0,0.330881918197182,0.217879444092406,0,0.269662616320329,0,0,0,1.40241773803446,24.694440679884,14.7008711385542,0,0,0,0,0,20.245001615226,0.109750285408626,0,0,0,0.325808305310325,3.11980435583874,4.3299402607582,2.20267769452646,25.5950953434091,0,0.462985512576611,0,0,0,1.23108503043699,0.702012795417713,2.52672975890838,0,0.335964256397719,0.283550194484773,0,0.290633938513962,0,0,0.44024217006613,0,0,0,0,0.763976851116555,0,1.71072446022705,0,0,0,0.897048674762886,0,1.10007428731425,19.9078442266978,3.57656445851882,0.845302752556,0.531876233169741,4.16029747645464,2.57207374262142,1.41849132023278,1.3321108950805,21.7326550360384,15.1934049509604,22.2274890930808,0.65147236858747,20.9681249758102,12.6712299669349,17.7849232465156,17.4306691720059,6.49824442683371,0,0,0,0.958499421966331,1.14861935834114,0,0.434343920002738,0.61642896765115,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,3.55805325985506,10.5035809422532,1.62759014219841,7.69492187663986,10.1704523614382,10.4083593922397,9.48845461440977,1.80567659836631,4.5481500811197,4.1389228517002,3.32112799267718,1.65932251687533,1.21637060255316,3.32861967686659,0.686286847621712,0,0,0,0,1.66435439510497,0.30239029332968,1.48864684691266,1.2276957863045,0.841980283299221,4.99742682097234,5.62877973973374,4.66476371316462,11.8734453155993,0.154209693802656,1.06537035187876,0.574890092096664,1.55776328755086,0.116210378459959,0,0.601519410909855,0,39.3813557204601,2.73136752010076,5.37610101333639,0,0,0.784349769176855,0,0,0,0,0.215915916102139,0,1.89662506280697,2.00675909541941,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,1.96808787419823,0.976135183992909,0,0.54941678891006,0.41254749960294,0,0,16.068392984416,0.096670718292122,0.616194468458578,0.307007349452259,0.413509717453592,5.47843248828196,2.61030049045611,0.596586391912706,0.623224249527161,0,0,0,0,0.929691098594572,2.20368642781448,0,0.616067160352178,0.532306030317022,0,0,0,0.744316738719335,11.7060387145929,49.5638504201945,4.60616024360401,4.70732886837312,3.18203247925937,0,2.51821440616641,10.4324071299701,8.36468056654374,0,0,0,4.38870365180631,1.21856744815642,0,2.32049849393576,34.927141692567,6.78048699721457,2.75682671773062,0,0,2.89387767133344,0,0.811641507850816,0.92947049429925,0.845086807596724,18.6434757865267,14.9338542339944,1.426684205925,0,1.26664581178598,3.29294892959902,4.9331512589543,6.29882496440969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0,0.798317485731266,0,0,0,0,0.228234679033192,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,1.55832187032068,10.8770556989661,0,0,1.65770349318689,0,6.85200172764437,0,0.622079175323615,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,2.79679015322043,0,0,0,0,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| ||
|short_description=p1@SLC12A8 | |short_description=p1@SLC12A8 | ||
}} | }} |
Latest revision as of 03:16, 20 September 2015
Short description: | p1@SLC12A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC12A8_5end |
Coexpression cluster: | C4277_mesothelioma_Smooth_normal_Prostate_Ewing_thyroid_glioblastoma |
Association with transcript: | 105bp_to_ENST00000479231_5end |
EntrezGene: | SLC12A8 |
HGNC: | 15595 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.71e-16 | 76 |
multi fate stem cell | 7.50e-09 | 427 |
somatic stem cell | 2.71e-08 | 433 |
connective tissue cell | 7.18e-08 | 361 |
stem cell | 1.38e-07 | 441 |
motile cell | 3.86e-07 | 386 |
mesothelial cell | 7.83e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.61e-08 | 371 |
anterior segment of eyeball | 2.17e-07 | 14 |
vasculature of organ | 2.61e-07 | 11 |
vasculature of eye | 7.43e-07 | 6 |
uvea | 7.43e-07 | 6 |
vasculature of head | 7.43e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.21e-07 | 14 |