FFCP PHASE1:Hg19::chr3:127395141..127395157,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80325 | |EntrezGene=80325 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18275 | |HGNC=18275 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-221bp_to_ENST00000478298_5end | |association_with_transcript=-221bp_to_ENST00000478298_5end | ||
|cluster_id=chr3:127395141..127395157,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_3_at_ABTB1_5end | |description=CAGE_peak_3_at_ABTB1_5end | ||
|id=chr3:127395141..127395157,+ | |id=chr3:127395141..127395157,+ | ||
|ontology_enrichment_celltype=CL:0002150!3.61e-10!3;CL:0000861!3.61e-10!3 | |ontology_enrichment_celltype=CL:0002150!3.61e-10!3;CL:0000861!3.61e-10!3 | ||
|ontology_enrichment_celltype_v019=CL:1000415;5.28e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,6.72e-10,253;CL:1000415,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.10e-32;29 | |||
|ontology_enrichment_disease=DOID:305!4.17e-07!106;DOID:3493!5.88e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3111;5.71e-13;1!DOID:3603;5.71e-13;1!DOID:305;4.02e-08;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.18e-23,106;DOID:0050687,1.42e-16,143;DOID:3111,7.68e-13,1;DOID:3603,7.68e-13,1;DOID:162,2.94e-09,235;DOID:14566,5.05e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.01e-27!9;UBERON:0001557!2.92e-14!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.26e-105;9!UBERON:0001557;5.26e-105;9!UBERON:0000072;3.00e-23;37!UBERON:0000065;1.48e-19;44!UBERON:0001004;2.64e-10;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.04e-105,9;UBERON:0001557,3.18e-49,19;UBERON:0008947,3.71e-24,38;UBERON:0003258,3.71e-24,38;UBERON:0000072,2.43e-19,47;UBERON:0000065,1.06e-16,54;UBERON:0001004,6.68e-12,74;UBERON:0001041,5.85e-10,87;UBERON:0001048,1.97e-07,160;UBERON:0004921,5.59e-07,118;UBERON:0001007,8.63e-07,145;UBERON:0001555,8.63e-07,145;UBERON:0007026,8.63e-07,145 | |||
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| ||
|short_description=p3@ABTB1 | |short_description=p3@ABTB1 | ||
}} | }} |
Latest revision as of 05:25, 20 September 2015
Short description: | p3@ABTB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ABTB1_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | -221bp_to_ENST00000478298_5end |
EntrezGene: | ABTB1 |
HGNC: | 18275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 6.72e-10 | 253 |
epithelial cell of gall bladder | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.04e-105 | 9 |
upper respiratory tract | 3.18e-49 | 19 |
respiratory primordium | 3.71e-24 | 38 |
endoderm of foregut | 3.71e-24 | 38 |
segment of respiratory tract | 2.43e-19 | 47 |
respiratory tract | 1.06e-16 | 54 |
respiratory system | 6.68e-12 | 74 |
foregut | 5.85e-10 | 87 |
primordium | 1.97e-07 | 160 |
subdivision of digestive tract | 5.59e-07 | 118 |
digestive system | 8.63e-07 | 145 |
digestive tract | 8.63e-07 | 145 |
primitive gut | 8.63e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.18e-23 | 106 |
cell type cancer | 1.42e-16 | 143 |
cystadenocarcinoma | 7.68e-13 | 1 |
mucinous cystadenocarcinoma | 7.68e-13 | 1 |
cancer | 2.94e-09 | 235 |
disease of cellular proliferation | 5.05e-09 | 239 |