FFCP PHASE1:Hg19::chr19:47200578..47200620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25865 | |EntrezGene=25865 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17293 | |HGNC=17293 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002pfe.2,uc002pff.2_5end | |association_with_transcript=0bp_to_uc002pfe.2,uc002pff.2_5end | ||
|cluster_id=chr19:47200578..47200620,- | |||
|description=CAGE_peak_7_at_PRKD2_5end | |description=CAGE_peak_7_at_PRKD2_5end | ||
|id=chr19:47200578..47200620,- | |id=chr19:47200578..47200620,- | ||
|ontology_enrichment_celltype=CL:0000039!4.63e-13!7;CL:0000586!4.63e-13!7;CL:0000066!3.50e-10!254;CL:0002322!6.03e-09!5;CL:0002202!1.05e-08!9;CL:0002632!1.05e-08!9;CL:0002368!3.91e-07!13;CL:0000082!5.91e-07!19 | |ontology_enrichment_celltype=CL:0000039!4.63e-13!7;CL:0000586!4.63e-13!7;CL:0000066!3.50e-10!254;CL:0002322!6.03e-09!5;CL:0002202!1.05e-08!9;CL:0002632!1.05e-08!9;CL:0002368!3.91e-07!13;CL:0000082!5.91e-07!19 | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.83e-22;7!CL:0000586;8.83e-22;7!CL:0000333;3.56e-11;5!CL:0002321;1.63e-09;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.95e-22,7;CL:0000586,7.95e-22,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.04e-15;10!UBERON:0005564;4.04e-15;10 | |||
|ontology_enrichment_disease=DOID:3095!4.36e-18!22;DOID:2994!4.36e-18!22;DOID:0050687!1.51e-17!143;DOID:162!1.15e-15!235;DOID:14566!5.75e-15!239;DOID:305!3.84e-12!106 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.78e-25;22!DOID:2994;2.78e-25;22!DOID:1036;1.12e-12;8!DOID:169;2.15e-09;6!DOID:8692;7.92e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.31e-25,22;DOID:2994,2.31e-25,22;DOID:1036,1.17e-12,8;DOID:162,9.79e-11,235;DOID:14566,2.09e-10,239;DOID:169,1.59e-09,6;DOID:0050687,3.14e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0008947!2.30e-15!38;UBERON:0003258!2.30e-15!38;UBERON:0000072!7.69e-13!46;UBERON:0000065!1.78e-12!53;UBERON:0001737!4.09e-11!9;UBERON:0001004!4.12e-10!72;UBERON:0000464!7.39e-09!104;UBERON:0000473!1.19e-08!8;UBERON:0007196!3.62e-08!14;UBERON:0001558!3.62e-08!14;UBERON:0005178!2.75e-07!34;UBERON:0002224!2.75e-07!34;UBERON:0005181!5.58e-07!35;UBERON:0004802!5.91e-07!19;UBERON:0000115!5.91e-07!19;UBERON:0002048!6.74e-07!22;UBERON:0000117!6.74e-07!22;UBERON:0000171!6.74e-07!22;UBERON:0000170!6.74e-07!22;UBERON:0005597!6.74e-07!22;UBERON:0000118!6.74e-07!22 | |ontology_enrichment_uberon=UBERON:0008947!2.30e-15!38;UBERON:0003258!2.30e-15!38;UBERON:0000072!7.69e-13!46;UBERON:0000065!1.78e-12!53;UBERON:0001737!4.09e-11!9;UBERON:0001004!4.12e-10!72;UBERON:0000464!7.39e-09!104;UBERON:0000473!1.19e-08!8;UBERON:0007196!3.62e-08!14;UBERON:0001558!3.62e-08!14;UBERON:0005178!2.75e-07!34;UBERON:0002224!2.75e-07!34;UBERON:0005181!5.58e-07!35;UBERON:0004802!5.91e-07!19;UBERON:0000115!5.91e-07!19;UBERON:0002048!6.74e-07!22;UBERON:0000117!6.74e-07!22;UBERON:0000171!6.74e-07!22;UBERON:0000170!6.74e-07!22;UBERON:0005597!6.74e-07!22;UBERON:0000118!6.74e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.01e-19;8!UBERON:0003135;1.00e-13;11!UBERON:0000013;3.56e-11;5!UBERON:0002410;3.56e-11;5!UBERON:0000991;4.58e-07;21!UBERON:0003101;9.88e-07;22!UBERON:0000079;9.88e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.01e-19,8;UBERON:0003135,1.00e-13,11;UBERON:0000013,2.46e-11,5;UBERON:0002410,2.46e-11,5;UBERON:0000991,4.58e-07,21;UBERON:0009196,4.58e-07,21;UBERON:0009117,4.58e-07,21;UBERON:0005564,4.58e-07,21;UBERON:0004176,9.88e-07,22;UBERON:0003101,9.88e-07,22;UBERON:0000079,9.88e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.795178609928912,1.04574548582567,0.10366105501537,0.504641701751257,2.55484151353081,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.772057809126758,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,1.56869953835371,0,0,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0.447749509444357,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41837027607914,0,0,0,0,0,0,0,0,0,0,0,0,6.89391541401302,0,0,0,0,0,0,0,0,0.333698283423817,0,1.11362469558097,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0.472775363535873,1.37897349296586,0.874813840149763,0,0,0,0,0,0,0,5.33798471243052,0,0,0,3.91958637459702,0.0897576444097721,0.54323685961004,0,0,0,0,0,0.332423363800313,3.15833924864053,4.31337575499027,6.71286347903371,10.6262090325544,0,0,0,0,1.73110911793673,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,1.06431964417994,0.292357268344742,0.985385484638511,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,2.3048767678104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.412618309791701,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,3.73541314327823,0,0.606596470166591,0.285465333544967,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,1.72992536041486,1.74735421107222,0,0,0.743614585554013,5.02780426175919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825788063434183,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26636751678362,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0.233939463462106,0,0,0.67767649223376,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.378499274505237,1.09265571963696,1.14028650910293,12.0346819095538,2.93939145792117,3.21632148371957,4.26202816797038,0.378893491091197,2.41167717140561,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0.538951212639521,0,0.122241444182866,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34171076742555,0.795178609928912,1.04574548582567,0.10366105501537,0.504641701751257,2.55484151353081,0,0,0,0,0,0.354920400119532,0,0.482022059766964,0.772057809126758,0.435758888184812,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0.205654985406647,0,0,0.224262168690721,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451199612907412,0,1.56869953835371,0,0,0,0,0.431831832204279,0,0,0,0.509752546090077,0,0.447749509444357,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41837027607914,0,0,0,0,0,0,0,0,0,0,0,0,6.89391541401302,0,0,0,0,0,0,0,0,0.333698283423817,0,1.11362469558097,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0,0,1.47787785689595,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,2.2882828526349,0.472775363535873,1.37897349296586,0.874813840149763,0,0,0,0,0,0,0,5.33798471243052,0,0,0,3.91958637459702,0.0897576444097721,0.54323685961004,0,0,0,0,0,0.332423363800313,3.15833924864053,4.31337575499027,6.71286347903371,10.6262090325544,0,0,0,0,1.73110911793673,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0,0,1.06431964417994,0.292357268344742,0.985385484638511,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0,0,2.3048767678104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.412618309791701,0,0,0,0,0,0,0.0524545881349981,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,3.73541314327823,0,0.606596470166591,0.285465333544967,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.617602894321944,0,0,0.38582807654183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,1.72992536041486,1.74735421107222,0,0,0.743614585554013,5.02780426175919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.825788063434183,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26636751678362,0,0.521574816907738,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0.233939463462106,0,0,0.67767649223376,0.109940516745429,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.378499274505237,1.09265571963696,1.14028650910293,12.0346819095538,2.93939145792117,3.21632148371957,4.26202816797038,0.378893491091197,2.41167717140561,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0.538951212639521,0,0.122241444182866,0.406896178315738,0,0,0 | ||
|short_description=p7@PRKD2 | |short_description=p7@PRKD2 | ||
}} | }} |
Latest revision as of 21:30, 18 September 2015
Short description: | p7@PRKD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRKD2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc002pfe.2, uc002pff.2_5end |
EntrezGene: | PRKD2 |
HGNC: | 17293 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.95e-22 | 7 |
germ cell | 7.95e-22 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 6.01e-19 | 8 |
male reproductive organ | 1.00e-13 | 11 |
sympathetic nervous system | 2.46e-11 | 5 |
autonomic nervous system | 2.46e-11 | 5 |
gonad | 4.58e-07 | 21 |
indifferent external genitalia | 4.58e-07 | 21 |
indifferent gonad | 4.58e-07 | 21 |
gonad primordium | 4.58e-07 | 21 |
external genitalia | 9.88e-07 | 22 |
male organism | 9.88e-07 | 22 |
male reproductive system | 9.88e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.31e-25 | 22 |
germ cell cancer | 2.31e-25 | 22 |
chronic leukemia | 1.17e-12 | 8 |
cancer | 9.79e-11 | 235 |
disease of cellular proliferation | 2.09e-10 | 239 |
neuroendocrine tumor | 1.59e-09 | 6 |
cell type cancer | 3.14e-07 | 143 |