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FFCP PHASE1:Hg19::chr3:15678163..15678169,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=NA
|EntrezGene=NA
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript
|HGNC=NA
|HGNC=NA
|TSSclassifier=strong
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr3:15678163..15678169,+
|coexpression_cluster_id=C2988
|description=CAGE_peak_at_chr3:15678163..15678169,+
|description=CAGE_peak_at_chr3:15678163..15678169,+
|id=chr3:15678163..15678169,+
|id=chr3:15678163..15678169,+
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|ontology_enrichment_celltype=CL:0002057!9.14e-27!42;CL:0000860!1.59e-24!45;CL:0000071!3.15e-21!18;CL:0002546!3.15e-21!18;CL:0002139!4.92e-20!24;CL:0000115!1.13e-18!35;CL:0000766!3.75e-18!76;CL:0000839!3.01e-17!70;CL:0000557!6.61e-17!71;CL:0002194!7.52e-17!63;CL:0000576!7.52e-17!63;CL:0000040!7.52e-17!63;CL:0000559!7.52e-17!63;CL:0002009!3.91e-16!65;CL:0002543!5.73e-15!6;CL:0002078!7.43e-14!44;CL:0000738!2.87e-12!140;CL:0002087!6.14e-12!119;CL:0000213!7.67e-11!57;CL:0000215!7.67e-11!57;CL:0002594!5.07e-10!4;CL:0000763!5.58e-10!112;CL:0000049!5.58e-10!112;CL:0002031!5.83e-10!124;CL:0002371!1.51e-09!591;CL:0000988!8.78e-09!182;CL:0000842!1.28e-08!3;CL:0000144!1.39e-08!625;CL:0000037!2.19e-08!172;CL:0000566!2.19e-08!172;CL:0002618!1.61e-07!3;CL:0000063!2.36e-07!578;CL:1000413!4.64e-07!9;CL:0002544!4.99e-07!6;CL:0000134!5.05e-07!358;CL:0002032!6.36e-07!165;CL:0000837!6.36e-07!165;CL:0000080!7.17e-07!6;CL:0000048!8.63e-07!430
|ontology_enrichment_celltype_v019=CL:0002393;1.03e-14;6!CL:0002397;1.03e-14;6!CL:0002543;1.55e-14;6!CL:0000226;4.69e-13;3!CL:0000842;4.69e-13;3!CL:0000071;8.47e-13;18!CL:0000860;7.81e-12;33!CL:0002057;7.81e-12;33!CL:0000576;1.85e-10;48!CL:0000473;1.33e-09;39!CL:0000234;1.33e-09;39!CL:0002139;1.46e-09;24!CL:0000115;1.55e-08;36!CL:0000766;1.15e-07;69
|ontology_enrichment_celltype_v019_2=CL:0000860,3.04e-20,42;CL:0002057,3.04e-20,42;CL:0000473,1.57e-17,48;CL:0000234,1.57e-17,48;CL:0002543,1.74e-14,6;CL:0002194,9.98e-14,59;CL:0000576,9.98e-14,59;CL:0000040,9.98e-14,59;CL:0000559,9.98e-14,59;CL:0002009,3.09e-13,61;CL:0000226,6.17e-13,3;CL:0000842,6.17e-13,3;CL:0000071,9.01e-13,18;CL:0002546,9.01e-13,18;CL:0000839,3.89e-12,66;CL:0000557,6.18e-12,67;CL:0000766,5.14e-11,72;CL:0002393,5.40e-10,9;CL:0002397,5.40e-10,9;CL:0002139,1.53e-09,24;CL:0002087,2.36e-09,115;CL:0000115,8.75e-09,36;CL:0000738,1.28e-07,136;CL:0002078,6.24e-07,45;CL:0000763,7.05e-07,108;CL:0000049,7.05e-07,108
|ontology_enrichment_development_v019=CL:0002057;2.98e-13;42!CL:0002546;8.47e-13;18
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003081!4.45e-23!216;UBERON:0001986!3.15e-21!18;UBERON:0004638!3.15e-21!18;UBERON:0004852!3.15e-21!18;UBERON:0000487!9.50e-17!22;UBERON:0002193!2.79e-16!112;UBERON:0002390!2.98e-16!102;UBERON:0003061!2.98e-16!102;UBERON:0002371!1.74e-15!80;UBERON:0006914!2.45e-14!25;UBERON:0001474!6.59e-14!86;UBERON:0002405!2.03e-13!115;UBERON:0000055!1.46e-11!69;UBERON:0001981!1.80e-11!60;UBERON:0007500!1.80e-11!60;UBERON:0004537!1.80e-11!60;UBERON:0006965!1.80e-11!60;UBERON:0004535!5.22e-11!110;UBERON:0004765!8.23e-11!101;UBERON:0001434!8.23e-11!101;UBERON:0001009!1.61e-10!113;UBERON:0004872!1.71e-10!84;UBERON:0001310!5.07e-10!4;UBERON:0001638!1.05e-09!9;UBERON:0003920!1.05e-09!9;UBERON:0004582!1.05e-09!9;UBERON:0002049!2.16e-09!79;UBERON:0007798!2.16e-09!79;UBERON:0000926!3.01e-09!448;UBERON:0004120!3.01e-09!448;UBERON:0006603!3.01e-09!448;UBERON:0002204!1.84e-07!167;UBERON:0003915!4.64e-07!9;UBERON:0004700!4.64e-07!9;UBERON:0001917!4.64e-07!9
|ontology_enrichment_uberon_v019=UBERON:0004638;8.47e-13;18!UBERON:0001986;8.47e-13;18!UBERON:0004852;8.47e-13;18!UBERON:0000487;1.91e-10;22!UBERON:0001638;7.20e-10;9!UBERON:0003920;7.20e-10;9!UBERON:0004582;7.20e-10;9!UBERON:0006914;3.59e-09;25!UBERON:0000490;7.11e-07;33
|ontology_enrichment_uberon_v019_2=UBERON:0003081,3.63e-13,203;UBERON:0004638,9.01e-13,18;UBERON:0001986,9.01e-13,18;UBERON:0004852,9.01e-13,18;UBERON:0002390,2.70e-11,98;UBERON:0003061,2.70e-11,98;UBERON:0000487,2.01e-10,22;UBERON:0002371,2.30e-10,76;UBERON:0002193,4.43e-10,108;UBERON:0001638,7.76e-10,9;UBERON:0003920,7.76e-10,9;UBERON:0004582,7.76e-10,9;UBERON:0000926,1.41e-09,315;UBERON:0004120,1.41e-09,315;UBERON:0006603,1.41e-09,315;UBERON:0001474,1.66e-09,82;UBERON:0006914,3.75e-09,25;UBERON:0004765,1.55e-08,90;UBERON:0002405,3.23e-08,93;UBERON:0001434,1.53e-07,100
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|short_description=p@chr3:15678163..15678169,+
|short_description=p@chr3:15678163..15678169,+
}}
}}

Latest revision as of 17:29, 29 July 2015

Short description:p@chr3:15678163..15678169, +
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_at_chr3:15678163..15678169, +
Coexpression cluster:C2988_CD14_Endothelial_Peripheral_Basophils_Hepatic_Skeletal_Mast
Association with transcript: NA
EntrezGene:NA
HGNC: NA
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data