FFCP PHASE1:Hg19::chr19:54641569..54641576,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4849 | |EntrezGene=4849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7879 | |HGNC=7879 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=66bp_to_ENST00000482247_5end | |association_with_transcript=66bp_to_ENST00000482247_5end | ||
|cluster_id=chr19:54641569..54641576,+ | |||
|description=CAGE_peak_3_at_CNOT3_5end | |description=CAGE_peak_3_at_CNOT3_5end | ||
|id=chr19:54641569..54641576,+ | |id=chr19:54641569..54641576,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000511;8.72e-18;1!CL:0002625;8.72e-18;1!CL:0000216;8.72e-18;1!CL:0000346;8.62e-07;3!CL:1000428;8.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,4.44e-18,1;CL:0002625,4.44e-18,1;CL:0000216,4.44e-18,1;CL:0000346,8.15e-07,3;CL:1000428,8.15e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4231;1.44e-09;2!DOID:1907;1.44e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4231,2.02e-09,2;DOID:1907,2.02e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0000473!9.65e-07!8 | |ontology_enrichment_uberon=UBERON:0000473!9.65e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002134;8.72e-18;1!UBERON:0001136;8.72e-18;1!UBERON:0001343;8.72e-18;1!UBERON:0005208;8.72e-18;1!UBERON:0004910;8.72e-18;1!UBERON:0004145;8.72e-18;1!UBERON:0005946;8.72e-18;1!UBERON:0004813;8.72e-18;1!UBERON:0005965;8.72e-18;1!UBERON:0002078;8.72e-18;1!UBERON:0002081;1.44e-09;2!UBERON:0002133;1.44e-09;2!UBERON:0004909;1.44e-09;2!UBERON:0000473;2.66e-09;8!UBERON:0003135;5.31e-07;11!UBERON:0003978;8.62e-07;3!UBERON:0004151;8.62e-07;3!UBERON:0000946;8.62e-07;3!UBERON:0000412;8.62e-07;3!UBERON:0001992;8.62e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,4.44e-18,1;UBERON:0001343,4.44e-18,1;UBERON:0004910,4.44e-18,1;UBERON:0005154,4.44e-18,1;UBERON:0005295,4.44e-18,1;UBERON:0004813,4.44e-18,1;UBERON:0005297,4.44e-18,1;UBERON:0005294,4.44e-18,1;UBERON:0010141,4.44e-18,1;UBERON:0005891,4.44e-18,1;UBERON:0002134,6.23e-18,1;UBERON:0005208,6.23e-18,1;UBERON:0005946,6.23e-18,1;UBERON:0005965,6.23e-18,1;UBERON:0002078,6.23e-18,1;UBERON:0004909,1.03e-09,2;UBERON:0002081,1.22e-09,2;UBERON:0002133,1.22e-09,2;UBERON:0010227,1.22e-09,2;UBERON:0000473,2.16e-09,8;UBERON:0003135,4.57e-07,11;UBERON:0004876,5.15e-07,11;UBERON:0003978,7.70e-07,3;UBERON:0009751,7.70e-07,3;UBERON:0004151,7.70e-07,3;UBERON:0000946,7.70e-07,3;UBERON:0002523,7.70e-07,3;UBERON:0005983,7.70e-07,3;UBERON:0004145,7.70e-07,3;UBERON:0002165,7.70e-07,3;UBERON:0002062,7.70e-07,3;UBERON:0007280,7.70e-07,3;UBERON:0000412,8.15e-07,3;UBERON:0001992,8.15e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0.0764134057479513,0,0.236132343941038,0,0.383829398097213,0,0.919421224478927,0.90361775633475,0.369754010166788,0,0.142169232487422,0,0,0,0,0.671746422719773,0.971680998056939,0.257575567634187,0,0.755751887377619,0.485168122375632,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0.199463657621632,0.426224750532694,0,0,0,0.251248665256743,0,0.217188844705117,0.605399502633369,0,0,0,0,0.209658645508376,0,0,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0.800791974072025,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.261958150995425,0,0,0,0.174129737299267,0,0,0,0,0.596287222100115,0,0.347140501607594,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0,0,0,0,0.134710672069688,0.163461903113459,0,0,0,0,0.570471821544449,0,0.23486899728753,0,0.421352420106746,0.408308342509787,0.122834317311768,0.103325781175765,2.37600571456411,0.494533858557114,0,0,0,0.250237039743928,0.277064115484183,0.877955241761676,0.612975591598039,0.600952235626387,0.113432183160021,0,0.213557388818567,0,0,0.103052529238439,0,0,0,0.194874010322397,0,0.0920498986422993,0,0,0.10075209822764,0,0,0,0,0.121973706129595,0,0.232387885739037,0.310983165046111,0.252320850875628,0.36497735907583,0,0,1.38134921352481,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.985326475791887,0.264145302039678,1.24396869324463,0.144119953416961,0.88369703398466,0,0,0,0,0.205654985406647,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,0,0.414415513436035,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.347534457872331,0.195801157462741,0,0.206768026122887,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0.116210378459959,0.483437798366489,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0.256450125116389,0,0,0.309123034943167,0.183138929636687,0.165018999841176,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0.165284915360978,0.384380134730212,0,0.30347334256665,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.409499734223957,0,0,0,0,0,0,0,0.405820753925408,0,0,0,0,0.7133421029625,0,0,0,0,0,0.288666338176536,0.670302275535787,0,0.282431402330337,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0.111443384277478,0,0,0.593929361665277,0.307160702099232,0,0,0.111308705022906,0,0.211125408127993,0.19924798825107,0.828851746593443,0.251932747854276,0,0.123084805461069,0.311039587661807,0,0,0.511572370226872,0.394573622547734,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0.221158519862449,0,0,0,0,0.692552326534174,0,0.23056390438806,0.718061155278177,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0.166211681900156,0,0,0.167821586975843,0.189753732724185,0,0,0,0,0,0,0.176915129006678,1.22206028986725,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0.126373159256976,2.70582154946087,0.414752765588989,0,0,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0.146178634172371,0,0.678923115418936,0,0,0,0.19871461170299,0,0.391102765469606,0.0801588202515337,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0.101998217636322,0,0.600420288709789,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0.229160424011684,1.43574604915363,0.199679000498991,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.0984274815147488,0,0,0,0.482259445395058,0.137539436597234,0,0.2249738915515,0,0.182248669974074,0,0.315222829196793,0.104909176269996,0.316801009558219,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0.113312091520126,1.31897010310274,0,0.258565912723101,0.13223260174269,0.171086837884329,0,0.427149650270779,0,0,0.496166021811951,0,0.121792598380896,0,0,0.2506898940227,0,0,0.628216385000937,0,0,0.1251909307065,0,0.221858103073705,0.0620964029413835,0,0,0.303298235083296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| ||
|short_description=p3@CNOT3 | |short_description=p3@CNOT3 | ||
}} | }} |
Latest revision as of 21:12, 19 September 2015
Short description: | p3@CNOT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNOT3_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_ENST00000482247_5end |
EntrezGene: | CNOT3 |
HGNC: | 7879 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 4.44e-18 | 1 |
seminiferous tubule epithelial cell | 4.44e-18 | 1 |
Sertoli cell | 4.44e-18 | 1 |
hair follicle dermal papilla cell | 8.15e-07 | 3 |
stem cell of epidermis | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 4.44e-18 | 1 |
seminiferous tubule of testis | 4.44e-18 | 1 |
epithelium of male gonad | 4.44e-18 | 1 |
epithelial cord | 4.44e-18 | 1 |
sex cord | 4.44e-18 | 1 |
seminiferous tubule epithelium | 4.44e-18 | 1 |
testis sex cord | 4.44e-18 | 1 |
genital ridge | 4.44e-18 | 1 |
primitive sex cord of indifferent gonad | 4.44e-18 | 1 |
coelomic epithelium | 4.44e-18 | 1 |
tricuspid valve | 6.23e-18 | 1 |
right atrium valve | 6.23e-18 | 1 |
outflow tract of atrium | 6.23e-18 | 1 |
outflow part of right atrium | 6.23e-18 | 1 |
right cardiac atrium | 6.23e-18 | 1 |
epithelium of gonad | 1.03e-09 | 2 |
cardiac atrium | 1.22e-09 | 2 |
atrioventricular valve | 1.22e-09 | 2 |
future cardiac atrium | 1.22e-09 | 2 |
testis | 2.16e-09 | 8 |
male reproductive organ | 4.57e-07 | 11 |
urogenital ridge | 5.15e-07 | 11 |
valve | 7.70e-07 | 3 |
cardiac mesenchyme | 7.70e-07 | 3 |
cardiac chamber | 7.70e-07 | 3 |
cardial valve | 7.70e-07 | 3 |
tunica intima | 7.70e-07 | 3 |
heart layer | 7.70e-07 | 3 |
outflow tract | 7.70e-07 | 3 |
endocardium | 7.70e-07 | 3 |
endocardial cushion | 7.70e-07 | 3 |
presumptive endocardium | 7.70e-07 | 3 |
dermal papilla | 8.15e-07 | 3 |
papillary layer of dermis | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
histiocytoma | 2.02e-09 | 2 |
malignant fibroxanthoma | 2.02e-09 | 2 |