FFCP PHASE1:Hg19::chr3:187930643..187930689,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4026 | |EntrezGene=4026 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6679 | |HGNC=6679 | ||
|TSSclassifier=strong | |||
|UniProt=Q93052 | |UniProt=Q93052 | ||
|association_with_transcript=-31bp_to_ENST00000312675,NM_005578,uc003frs.1_5end | |association_with_transcript=-31bp_to_ENST00000312675,NM_005578,uc003frs.1_5end | ||
|cluster_id=chr3:187930643..187930689,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_10_at_LPP_5end | |description=CAGE_peak_10_at_LPP_5end | ||
|id=chr3:187930643..187930689,+ | |id=chr3:187930643..187930689,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002594;1.33e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,1.80e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0006603;2.67e-13;65!UBERON:0007297;3.85e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;9.34e-07;3!DOID:127;9.34e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,6.52e-07,3;DOID:127,6.52e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.35e-15!115;UBERON:0000481!2.77e-07!347;UBERON:0000468!4.33e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0004175;1.98e-16;21!UBERON:0006947;1.01e-14;3!UBERON:0004054;1.01e-14;3!UBERON:0005904;3.65e-11;4!UBERON:0001310;1.33e-10;4!UBERON:0003135;1.55e-10;11!UBERON:0003133;1.63e-10;44!UBERON:0005409;3.67e-09;22!UBERON:0000160;6.97e-09;17!UBERON:0003975;9.22e-09;18!UBERON:0001155;1.21e-08;9!UBERON:0005156;3.31e-07;59!UBERON:0000990;3.31e-07;59!UBERON:0003101;3.55e-07;22!UBERON:0000079;3.55e-07;22!UBERON:0004921;4.01e-07;33!UBERON:0000059;4.46e-07;11!UBERON:0003134;8.27e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.43e-20,114;UBERON:0006947,1.16e-14,3;UBERON:0004054,1.16e-14,3;UBERON:0003133,1.09e-13,48;UBERON:0004175,1.21e-13,25;UBERON:0005156,1.70e-12,59;UBERON:0000990,1.70e-12,59;UBERON:0005904,4.05e-11,4;UBERON:0003135,1.56e-10,11;UBERON:0001310,1.80e-10,4;UBERON:0005409,3.07e-10,25;UBERON:0000160,6.88e-09,17;UBERON:0001155,1.20e-08,9;UBERON:0003064,2.29e-07,28;UBERON:0003101,3.59e-07,22;UBERON:0000079,3.59e-07,22;UBERON:0003975,3.85e-07,22;UBERON:0000059,4.43e-07,11;UBERON:0003134,7.21e-07,37;UBERON:0000474,7.21e-07,37;UBERON:0004876,7.49e-07,11 | |||
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| ||
|short_description=p10@LPP | |short_description=p10@LPP | ||
}} | }} |
Latest revision as of 07:38, 17 September 2015
Short description: | p10@LPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LPP_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -31bp_to_ENST00000312675, NM_005578, uc003frs.1_5end |
EntrezGene: | LPP |
HGNC: | 6679 |
UniProt: | Q93052 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 1.80e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
adult organism | 5.43e-20 | 114 |
male genital duct | 1.16e-14 | 3 |
internal male genitalia | 1.16e-14 | 3 |
reproductive organ | 1.09e-13 | 48 |
internal genitalia | 1.21e-13 | 25 |
reproductive structure | 1.70e-12 | 59 |
reproductive system | 1.70e-12 | 59 |
duct of male reproductive system | 4.05e-11 | 4 |
male reproductive organ | 1.56e-10 | 11 |
umbilical artery | 1.80e-10 | 4 |
gastrointestinal system | 3.07e-10 | 25 |
intestine | 6.88e-09 | 17 |
colon | 1.20e-08 | 9 |
intermediate mesoderm | 2.29e-07 | 28 |
male organism | 3.59e-07 | 22 |
male reproductive system | 3.59e-07 | 22 |
internal female genitalia | 3.85e-07 | 22 |
large intestine | 4.43e-07 | 11 |
female reproductive organ | 7.21e-07 | 37 |
female reproductive system | 7.21e-07 | 37 |
urogenital ridge | 7.49e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 6.52e-07 | 3 |
leiomyoma | 6.52e-07 | 3 |