FFCP PHASE1:Hg19::chr3:193548514..193548518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:193548514..193548518,- | |||
|description=CAGE_peak_at_chr3:193548514..193548518,- | |description=CAGE_peak_at_chr3:193548514..193548518,- | ||
|id=chr3:193548514..193548518,- | |id=chr3:193548514..193548518,- | ||
|ontology_enrichment_celltype=CL:0002368!5.69e-14!13;CL:0002076!2.91e-10!43;CL:0002202!1.93e-09!9;CL:0002632!1.93e-09!9;CL:0002623!5.22e-08!3;CL:0002328!5.60e-08!3;CL:0000068!8.48e-08!3;CL:0000069!8.48e-08!3;CL:0000307!8.48e-08!3;CL:0000377!8.48e-08!3;CL:0000223!5.35e-07!59 | |ontology_enrichment_celltype=CL:0002368!5.69e-14!13;CL:0002076!2.91e-10!43;CL:0002202!1.93e-09!9;CL:0002632!1.93e-09!9;CL:0002623!5.22e-08!3;CL:0002328!5.60e-08!3;CL:0000068!8.48e-08!3;CL:0000069!8.48e-08!3;CL:0000307!8.48e-08!3;CL:0000377!8.48e-08!3;CL:0000223!5.35e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0002327;2.06e-29;4!CL:0002623;1.04e-10;3!CL:0000622;6.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,2.37e-29,4;CL:0002623,9.90e-11,3;CL:0000622,6.04e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.33e-15;2 | |||
|ontology_enrichment_disease=DOID:1749!1.57e-22!14 | |||
|ontology_enrichment_disease_v019=DOID:4556;1.04e-10;3!DOID:1749;4.95e-09;14!DOID:3908;6.21e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4556,1.09e-10,3;DOID:1749,5.36e-09,14;DOID:3908,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000369!3.76e-12!4;UBERON:0002435!3.76e-12!4;UBERON:0000204!3.76e-12!4;UBERON:0010082!3.76e-12!4;UBERON:0000065!1.10e-09!53;UBERON:0001004!1.79e-09!72;UBERON:0002308!2.01e-09!9;UBERON:0000125!2.01e-09!9;UBERON:0007196!5.12e-09!14;UBERON:0001558!5.12e-09!14;UBERON:0005383!5.22e-08!3;UBERON:0005382!5.22e-08!3;UBERON:0004815!5.60e-08!3;UBERON:0002031!5.60e-08!3;UBERON:0007023!6.61e-08!115;UBERON:0001723!9.08e-08!3;UBERON:0001033!9.08e-08!3;UBERON:0010056!9.08e-08!3;UBERON:0000072!1.44e-07!46;UBERON:0009663!3.88e-07!7;UBERON:0003126!4.60e-07!7;UBERON:0001005!4.60e-07!7;UBERON:0000078!5.69e-07!18;UBERON:0000997!7.77e-07!1;UBERON:0005056!7.77e-07!1;UBERON:0002336!8.21e-07!1;UBERON:0001018!8.21e-07!1;UBERON:0002473!8.21e-07!1;UBERON:0005340!8.21e-07!1;UBERON:0002316!8.21e-07!1;UBERON:0003544!8.21e-07!1;UBERON:0001020!8.21e-07!1;UBERON:0005970!8.21e-07!1;UBERON:0002437!8.21e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.06e-29;4!UBERON:0000997;2.73e-29;1!UBERON:0005056;2.73e-29;1!UBERON:0004176;2.73e-29;1!UBERON:0001873;1.33e-15;2!UBERON:0005383;7.42e-11;3!UBERON:0005382;7.42e-11;3!UBERON:0002365;8.68e-09;31!UBERON:0002330;8.68e-09;31!UBERON:0000369;1.82e-08;4!UBERON:0002435;1.82e-08;4!UBERON:0000204;1.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,2.37e-29,4;UBERON:0005333,2.37e-29,4;UBERON:0008425,2.37e-29,4;UBERON:0005311,2.37e-29,4;UBERON:0000997,4.20e-29,1;UBERON:0005056,4.20e-29,1;UBERON:0001873,1.15e-15,2;UBERON:0010122,1.15e-15,2;UBERON:0000076,3.06e-15,8;UBERON:0005383,6.73e-11,3;UBERON:0005382,6.73e-11,3;UBERON:0002365,5.85e-09,31;UBERON:0002330,5.85e-09,31;UBERON:0000369,1.70e-08,4;UBERON:0002435,1.70e-08,4;UBERON:0000204,1.70e-08,4;UBERON:0010082,1.70e-08,4;UBERON:0005153,1.33e-07,37;UBERON:0003100,6.54e-07,41 | |||
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|short_description=p@chr3:193548514..193548518,- | |short_description=p@chr3:193548514..193548518,- | ||
}} | }} |
Latest revision as of 19:35, 29 July 2015
Short description: | p@chr3:193548514..193548518, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:193548514..193548518, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 2.37e-29 | 4 |
acinar cell of salivary gland | 9.90e-11 | 3 |
acinar cell | 6.04e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 2.37e-29 | 4 |
mammary bud | 2.37e-29 | 4 |
mammary ridge | 2.37e-29 | 4 |
mammary placode | 2.37e-29 | 4 |
mammalian vulva | 4.20e-29 | 1 |
external female genitalia | 4.20e-29 | 1 |
caudate nucleus | 1.15e-15 | 2 |
future caudate nucleus | 1.15e-15 | 2 |
external ectoderm | 3.06e-15 | 8 |
caudate-putamen | 6.73e-11 | 3 |
dorsal striatum | 6.73e-11 | 3 |
exocrine gland | 5.85e-09 | 31 |
exocrine system | 5.85e-09 | 31 |
corpus striatum | 1.70e-08 | 4 |
striatum | 1.70e-08 | 4 |
ventral part of telencephalon | 1.70e-08 | 4 |
future corpus striatum | 1.70e-08 | 4 |
epithelial bud | 1.33e-07 | 37 |
female organism | 6.54e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
lung large cell carcinoma | 1.09e-10 | 3 |
squamous cell carcinoma | 5.36e-09 | 14 |
non-small cell lung carcinoma | 6.39e-07 | 5 |