FFCP PHASE1:Hg19::chr19:9077370..9077388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:9077370..9077388,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_at_chr19:9077370..9077388,- | |description=CAGE_peak_at_chr19:9077370..9077388,- | ||
|id=chr19:9077370..9077388,- | |id=chr19:9077370..9077388,- | ||
|ontology_enrichment_celltype=CL:0002150!5.25e-10!3;CL:0000861!5.25e-10!3;CL:0000066!3.56e-08!254;CL:0002536!6.26e-07!2;CL:1000415!6.45e-07!2 | |ontology_enrichment_celltype=CL:0002150!5.25e-10!3;CL:0000861!5.25e-10!3;CL:0000066!3.56e-08!254;CL:0002536!6.26e-07!2;CL:1000415!6.45e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.27e-10;5!CL:0000349;3.39e-10;19!CL:0002149;7.92e-09;6!CL:0002255;7.92e-09;6!CL:1000415;4.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.27e-10,5;CL:0000349,3.55e-10,19;CL:0002149,6.77e-09,6;CL:0002255,6.77e-09,6;CL:1000415,4.17e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.12e-16!106;DOID:0050687!1.92e-12!143;DOID:162!1.83e-07!235;DOID:14566!3.89e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:178;3.33e-13;1!DOID:326;3.33e-13;1!DOID:3978;3.33e-13;1!DOID:3394;3.33e-13;1!DOID:5844;3.33e-13;1!DOID:6193;3.33e-13;1!DOID:3001;7.92e-09;6!DOID:299;9.17e-08;25!DOID:114;3.09e-07;2!DOID:3350;3.09e-07;2!DOID:4468;4.42e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,2.95e-13,1;DOID:178,3.33e-13,1;DOID:326,3.33e-13,1;DOID:3978,3.33e-13,1;DOID:3394,3.33e-13,1;DOID:5844,3.33e-13,1;DOID:3001,6.77e-09,6;DOID:299,9.17e-08,25;DOID:3350,2.91e-07,2;DOID:114,3.09e-07,2;DOID:4468,5.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!3.11e-20!14;UBERON:0000158!3.11e-20!14;UBERON:0000305!5.06e-11!7;UBERON:0000478!7.15e-11!24;UBERON:0003124!7.35e-11!7;UBERON:0004871!1.37e-09!8;UBERON:0004923!4.16e-08!57;UBERON:0001987!2.09e-07!4;UBERON:0004340!2.09e-07!4;UBERON:0003133!3.47e-07!48;UBERON:0003127!5.40e-07!2;UBERON:0000341!7.25e-07!2;UBERON:0002294!8.97e-07!7;UBERON:0001173!8.97e-07!7;UBERON:0004912!8.97e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!3.11e-20!14;UBERON:0000158!3.11e-20!14;UBERON:0000305!5.06e-11!7;UBERON:0000478!7.15e-11!24;UBERON:0003124!7.35e-11!7;UBERON:0004871!1.37e-09!8;UBERON:0004923!4.16e-08!57;UBERON:0001987!2.09e-07!4;UBERON:0004340!2.09e-07!4;UBERON:0003133!3.47e-07!48;UBERON:0003127!5.40e-07!2;UBERON:0000341!7.25e-07!2;UBERON:0002294!8.97e-07!7;UBERON:0001173!8.97e-07!7;UBERON:0004912!8.97e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.64e-11;10!UBERON:0000158;2.64e-11;10!UBERON:0000478;4.11e-08;24!UBERON:0000305;7.81e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.01e-13,14;UBERON:0000158,1.01e-13,14;UBERON:0000478,4.26e-08,24;UBERON:0000305,7.81e-08,7;UBERON:0003124,1.68e-07,7;UBERON:0004871,5.88e-07,8 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84991942105343,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,5.49112314896687,0.593929361665277,20.8869277427478,0,0,0,0,0,0.796991953004279,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.269272933229316,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90915712168644,0.293977192243133,0,0,2.92376255201748,0.870806981601766,1.16942907337897,0.739039113478883,0,0,1.35588444468319,0,0,0,1.56441106187842,0.160317640503067,0,0.39961921916426,0,0,0,0,0,1.88555227693436,0,0,0,0,0,0,0,0,0,0,0,0,2.1964690054889,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27134268827375,0,0,0,0,0,0,0,0,0,0,0,0,2.11444506695002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.194129016684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.183428598521679,0,0,0,0,0,0,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,9.85159534739415,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0,0,0,0,0.213233981900981,0.714193294391221,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.573777643141411,0.665320713092027,0.651226148887796,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p@chr19:9077370..9077388,- | |short_description=p@chr19:9077370..9077388,- | ||
}} | }} |
Latest revision as of 18:45, 27 July 2015
Short description: | p@chr19:9077370..9077388, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:9077370..9077388, - |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.27e-10 | 5 |
extraembryonic cell | 3.55e-10 | 19 |
epithelial cell of uterus | 6.77e-09 | 6 |
stromal cell of endometrium | 6.77e-09 | 6 |
epithelial cell of gall bladder | 4.17e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.01e-13 | 14 |
membranous layer | 1.01e-13 | 14 |
extraembryonic structure | 4.26e-08 | 24 |
amnion | 7.81e-08 | 7 |
chorion | 1.68e-07 | 7 |
somatic layer of lateral plate mesoderm | 5.88e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 2.95e-13 | 1 |
vascular disease | 3.33e-13 | 1 |
ischemia | 3.33e-13 | 1 |
extrinsic cardiomyopathy | 3.33e-13 | 1 |
myocardial ischemia | 3.33e-13 | 1 |
myocardial infarction | 3.33e-13 | 1 |
female reproductive endometrioid cancer | 6.77e-09 | 6 |
adenocarcinoma | 9.17e-08 | 25 |
mesenchymal cell neoplasm | 2.91e-07 | 2 |
heart disease | 3.09e-07 | 2 |
clear cell adenocarcinoma | 5.28e-07 | 2 |