FFCP PHASE1:Hg19::chr3:49059193..49059206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25915 | |EntrezGene=25915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29918 | |HGNC=29918 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BU61,Q9Y3Z0,A4FU71 | |UniProt=Q9BU61,Q9Y3Z0,A4FU71 | ||
|association_with_transcript=119bp_to_NM_199069,NM_199070,uc003cvq.2,uc003cvr.2,uc003cvs.2_5end | |association_with_transcript=119bp_to_NM_199069,NM_199070,uc003cvq.2,uc003cvr.2,uc003cvs.2_5end | ||
|cluster_id=chr3:49059193..49059206,+ | |||
|description=CAGE_peak_9_at_NDUFAF3_5end | |description=CAGE_peak_9_at_NDUFAF3_5end | ||
|id=chr3:49059193..49059206,+ | |id=chr3:49059193..49059206,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.89e-19!254;CL:0000223!3.44e-08!59;CL:0000012!3.46e-08!682;CL:0002321!6.20e-08!248;CL:0000220!1.21e-07!246;CL:0000548!1.23e-07!679;CL:0000004!1.23e-07!679;CL:0000255!1.23e-07!679;CL:0002076!3.06e-07!43 | |ontology_enrichment_celltype=CL:0000066!1.89e-19!254;CL:0000223!3.44e-08!59;CL:0000012!3.46e-08!682;CL:0002321!6.20e-08!248;CL:0000220!1.21e-07!246;CL:0000548!1.23e-07!679;CL:0000004!1.23e-07!679;CL:0000255!1.23e-07!679;CL:0002076!3.06e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0000317;2.68e-14;2!CL:1000448;2.68e-14;2!CL:0002308;2.68e-14;2!CL:0002140;2.68e-14;2!CL:0002577;7.82e-10;3!CL:0002159;8.75e-08;14!CL:0002327;1.39e-07;4!CL:0000362;3.42e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.20e-14,2;CL:1000448,1.20e-14,2;CL:0002308,1.20e-14,2;CL:0002140,1.20e-14,2;CL:0002577,3.19e-10,3;CL:0002159,7.88e-08,14;CL:0002327,1.39e-07,4;CL:0000066,1.62e-07,253;CL:0000362,2.76e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0008425;5.39e-08;1!UBERON:0008947;9.43e-08;29 | |||
|ontology_enrichment_disease=DOID:305!1.73e-12!106;DOID:162!1.25e-10!235;DOID:0050687!1.66e-10!143;DOID:14566!3.70e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.44e-26;9!UBERON:0001557;4.44e-26;9!UBERON:0002419;2.68e-14;2!UBERON:0007771;2.68e-14;2!UBERON:0003297;2.68e-14;2!UBERON:0001821;2.68e-14;2!UBERON:0003487;2.68e-14;2!UBERON:0001820;2.68e-14;2!UBERON:0001801;8.75e-08;14!UBERON:0001987;1.39e-07;4!UBERON:0001911;1.39e-07;4!UBERON:0003891;1.39e-07;4!UBERON:0000964;1.39e-07;4!UBERON:0010409;1.39e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.69e-26,9;UBERON:0002419,1.20e-14,2;UBERON:0007771,1.20e-14,2;UBERON:0003297,1.20e-14,2;UBERON:0001821,1.20e-14,2;UBERON:0003487,1.20e-14,2;UBERON:0001820,1.20e-14,2;UBERON:0005089,1.20e-14,2;UBERON:0005088,1.20e-14,2;UBERON:0005085,1.58e-12,31;UBERON:0001557,5.01e-12,19;UBERON:0001048,1.23e-08,160;UBERON:0000076,4.45e-08,8;UBERON:0001987,7.11e-08,4;UBERON:0004340,7.11e-08,4;UBERON:0001801,1.26e-07,14;UBERON:0001911,1.39e-07,4;UBERON:0005333,1.39e-07,4;UBERON:0008425,1.39e-07,4;UBERON:0005311,1.39e-07,4;UBERON:0000964,2.28e-07,4;UBERON:0010409,2.28e-07,4;UBERON:0004348,2.28e-07,4;UBERON:0005427,2.28e-07,4;UBERON:0003891,2.51e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0.446961094427288,0,0,0,0,0.737201809504527,2.79120467188971,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0.975865597581014,0.369363174230364,0.204000691244253,0,0,0,0.251085279189606,0.0764134057479513,0,0,0,0,0,0.919421224478927,0.30120591877825,0,0,0.284338464974843,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0,0.570025487482497,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0.260118695119756,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0,0.443458794925128,0.175669571386252,2.29213382120997,0,1.11235332835329,0,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0.860234595106124,0,0,0,0.825354125820202,0,0,0,0,0,0,0.976248230192678,0,0,0.0892997282840798,0,0.112611480483322,0,0,0.183201743930407,0,0,0.436094052142534,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0,0,0.49333509683432,0,0.269421344139376,0.163461903113459,0,0,0.234321431833797,0.312160076830321,0,0,0,0,0.140450806702248,0,0,0,0,0.494533858557114,0.910161361938026,0,0,0.250237039743928,0.554128230968366,0,0,0,0.113432183160021,0.179389635688862,0,0.211931901159562,0,0,0.257640540045629,0,0.168776332241266,0,0,0.0920498986422993,0,0,0.403008392910561,0.169560592310488,0.193260853163297,0.818238361772504,0.573609190778008,0.121973706129595,0.397589304964456,0.116193942869518,0,0.252320850875628,0.36497735907583,0,0,0,0,0,1.18306800039844,0.842923450390509,1.20505514941741,1.10293972732394,1.08939722046203,1.18635309555548,1.07865046528132,0.784885860501384,0,0.738155454624648,0,0.4115740113314,0,0,0.982827216677626,0,0,0.491953754172454,0.343135620597051,0.548751427043128,1.1240175325762,0.201057944823262,0.185176890317059,0,1.03993478527958,0,0.231860809950154,0.469634776943287,0.144366447761074,0,0,0.790204397959275,0,0,0.234004265139238,0,0,0.335964256397719,0.141775097242386,0.0895585227028483,0.290633938513962,1.53353071666084,0,0.264145302039678,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0.07333828582095,0,0,0.845302752556,0.26593811658487,0,0,0,0.799266537048298,0,0,0,0.325736184293735,0.355391948742546,0,0.301439377059586,0.871533458600294,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0.500170521059677,0.271265023699736,0.207970861530807,0,0,0,0,0,1.03473071292505,0,0,0,0.587403472388222,0,0,0,0,0,1.66435439510497,1.5119514666484,0.496215615637554,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.725156697549733,0.802025881213139,0.0920809889358963,0.114814448164607,0,0.131124414959424,0.902399225814824,0.385076685522074,0,1.46139224653261,0.633309773357254,0,0.510281115829547,0.647747748306418,0,1.08378575017541,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0,0,0,1.14853107599234,1.95018073810956,0,0.096670718292122,0,0,0,0.107420244868274,0,0,0.0890320356467374,0.165284915360978,0.576570202095319,0.255225424989168,0.30347334256665,0.464845549297286,0,0.6970372701606,0,0,0,0.37064843820784,0.715624433709956,0,0.632758849437452,0.38126038784765,0.511795582622668,0,0.318203247925937,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0.136499911407986,0.141405431953713,0,0.551365343546124,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0.6196469961995,0,0.286822704408103,0.294747123039363,0.35667105148125,0,0,0,0,1.04980416073495,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0.245040215981032,0,0.144269212976445,0.213425530045242,0.797131363644112,0,0.383010740264733,0.211673582723883,0.649243880549111,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0.834245708559542,0,0.556812347790485,0,0.540911356951966,0.33307196799782,0,0.37428108081644,0.146508179271894,0.242721043499027,1.11443384277478,0,0,0.593929361665277,0,0,0,0,0,0.211125408127993,0,0,0.755798243562828,0,0.246169610922139,0,0.718946809178615,0.358042349351218,0,0,0,0,0,0,0,0.7812832832557,1.04951999995435,0,0.1137934482855,0.254253650292766,0.709163045303809,0.344743373241465,0,0,0,0,0,0,0,0,0.21787692703798,0.697118721393016,0,0.113942055847001,0,0.269272933229316,0.325942115766024,0,0,0.533034776018635,0,0,0,0,0,0,0,0.317873157960757,0.210998064528027,0.163232808159148,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0,0.247127877893006,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0.19566461893209,0.728341138602278,0,0,0,0,0.450970258243478,0.414752765588989,0,0,0,0,0.284609546029793,0.277349346026277,0.867798691675654,0,0.957651272384428,0.17472666824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| 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| ||
|short_description=p9@NDUFAF3 | |short_description=p9@NDUFAF3 | ||
}} | }} |
Latest revision as of 15:39, 18 September 2015
Short description: | p9@NDUFAF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NDUFAF3_5end |
Coexpression cluster: | NA |
Association with transcript: | 119bp_to_NM_199069, NM_199070, uc003cvq.2, uc003cvr.2, uc003cvs.2_5end |
EntrezGene: | NDUFAF3 |
HGNC: | 29918 |
UniProt: | Q9BU61Q9Y3Z0A4FU71 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.20e-14 | 2 |
epithelial cell of sweat gland | 1.20e-14 | 2 |
epithelial cell of skin gland | 1.20e-14 | 2 |
acinar cell of sebaceous gland | 1.20e-14 | 2 |
placental epithelial cell | 3.19e-10 | 3 |
general ecto-epithelial cell | 7.88e-08 | 14 |
mammary gland epithelial cell | 1.39e-07 | 4 |
epithelial cell | 1.62e-07 | 253 |
epidermal cell | 2.76e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.69e-26 | 9 |
skin gland | 1.20e-14 | 2 |
epidermis gland | 1.20e-14 | 2 |
gland of integumental system | 1.20e-14 | 2 |
sebaceous gland | 1.20e-14 | 2 |
skin sebaceous gland | 1.20e-14 | 2 |
sweat gland | 1.20e-14 | 2 |
sweat gland placode | 1.20e-14 | 2 |
sebaceous gland placode | 1.20e-14 | 2 |
ectodermal placode | 1.58e-12 | 31 |
upper respiratory tract | 5.01e-12 | 19 |
primordium | 1.23e-08 | 160 |
external ectoderm | 4.45e-08 | 8 |
placenta | 7.11e-08 | 4 |
allantois | 7.11e-08 | 4 |
anterior segment of eyeball | 1.26e-07 | 14 |
mammary gland | 1.39e-07 | 4 |
mammary bud | 1.39e-07 | 4 |
mammary ridge | 1.39e-07 | 4 |
mammary placode | 1.39e-07 | 4 |
cornea | 2.28e-07 | 4 |
eye surface | 2.28e-07 | 4 |
optic eminence | 2.28e-07 | 4 |
corneal primordium | 2.28e-07 | 4 |
stroma | 2.51e-07 | 4 |