FFCP PHASE1:Hg19::chr1:111058061..111058076,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:111058061..111058076,+ | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_at_chr1:111058061..111058076,+ | |description=CAGE_peak_at_chr1:111058061..111058076,+ | ||
|id=chr1:111058061..111058076,+ | |id=chr1:111058061..111058076,+ | ||
|ontology_enrichment_celltype=CL:0000840!2.05e-33!5;CL:0001029!2.05e-33!5;CL:0000990!1.46e-22!8;CL:0000235!1.12e-20!10;CL:0000451!1.32e-18!10;CL:0002194!1.91e-12!63;CL:0000576!1.91e-12!63;CL:0000040!1.91e-12!63;CL:0000559!1.91e-12!63;CL:0002009!4.55e-12!65;CL:0000839!3.22e-11!70;CL:0000557!4.62e-11!71;CL:0000766!2.42e-10!76;CL:0000763!5.06e-07!112;CL:0000049!5.06e-07!112 | |ontology_enrichment_celltype=CL:0000840!2.05e-33!5;CL:0001029!2.05e-33!5;CL:0000990!1.46e-22!8;CL:0000235!1.12e-20!10;CL:0000451!1.32e-18!10;CL:0002194!1.91e-12!63;CL:0000576!1.91e-12!63;CL:0000040!1.91e-12!63;CL:0000559!1.91e-12!63;CL:0002009!4.55e-12!65;CL:0000839!3.22e-11!70;CL:0000557!4.62e-11!71;CL:0000766!2.42e-10!76;CL:0000763!5.06e-07!112;CL:0000049!5.06e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000235;5.37e-50;6!CL:0000473;1.42e-08;39!CL:0000234;1.42e-08;39!CL:0000840;8.02e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.37e-50,6;CL:0002194,2.10e-09,59;CL:0000576,2.10e-09,59;CL:0000040,2.10e-09,59;CL:0000559,2.10e-09,59;CL:0002009,4.07e-09,61;CL:0000839,1.78e-08,66;CL:0000557,2.34e-08,67;CL:0000766,8.09e-08,72;CL:0000473,6.00e-07,48;CL:0000234,6.00e-07,48;CL:0000840,8.02e-07,5;CL:0001029,8.02e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!2.10e-23!1;UBERON:0006518!2.10e-23!1;UBERON:0008949!2.10e-23!1;UBERON:0000101!2.10e-23!1;UBERON:0002167!2.10e-23!1;UBERON:0002371!7.88e-10!80;UBERON:0001474!3.78e-09!86;UBERON:0004765!8.61e-08!101;UBERON:0001434!8.61e-08!101;UBERON:0002390!1.03e-07!102;UBERON:0003061!1.03e-07!102;UBERON:0002193!5.06e-07!112;UBERON:0002405!7.74e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;7.06e-34;1!UBERON:0006518;7.06e-34;1!UBERON:0008949;7.06e-34;1!UBERON:0000101;7.06e-34;1!UBERON:0002167;7.06e-34;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,5.05e-34,1;UBERON:0006518,5.05e-34,1;UBERON:0008949,5.05e-34,1;UBERON:0000101,5.05e-34,1;UBERON:0002167,5.05e-34,1;UBERON:0002371,1.95e-07,76;UBERON:0001474,6.23e-07,82 | |||
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|short_description=p@chr1:111058061..111058076,+ | |short_description=p@chr1:111058061..111058076,+ | ||
}} | }} |
Latest revision as of 19:33, 27 July 2015
Short description: | p@chr1:111058061..111058076, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:111058061..111058076, + |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.37e-50 | 6 |
monopoietic cell | 2.10e-09 | 59 |
monocyte | 2.10e-09 | 59 |
monoblast | 2.10e-09 | 59 |
promonocyte | 2.10e-09 | 59 |
macrophage dendritic cell progenitor | 4.07e-09 | 61 |
myeloid lineage restricted progenitor cell | 1.78e-08 | 66 |
granulocyte monocyte progenitor cell | 2.34e-08 | 67 |
myeloid leukocyte | 8.09e-08 | 72 |
defensive cell | 6.00e-07 | 48 |
phagocyte | 6.00e-07 | 48 |
immature conventional dendritic cell | 8.02e-07 | 5 |
common dendritic progenitor | 8.02e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 5.05e-34 | 1 |
right lung lobe | 5.05e-34 | 1 |
lower lobe of lung | 5.05e-34 | 1 |
lobe of lung | 5.05e-34 | 1 |
right lung | 5.05e-34 | 1 |
bone marrow | 1.95e-07 | 76 |
bone element | 6.23e-07 | 82 |