FFCP PHASE1:Hg19::chr12:46662390..46662441,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:46662390..46662441,-
|short_description=p3@SLC38A1
|description=CAGE_peak_3_at_SLC38A1_5end
|association_with_transcript=147bp_to_ENST00000551506_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=81539 | |EntrezGene=81539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13447 | |HGNC=13447 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=147bp_to_ENST00000551506_5end | |||
|cluster_id=chr12:46662390..46662441,- | |||
|description=CAGE_peak_3_at_SLC38A1_5end | |||
|id=chr12:46662390..46662441,- | |||
|ontology_enrichment_celltype=CL:0000066!2.90e-21!254;CL:0002076!1.54e-07!43;CL:0002139!2.86e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.96e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.80e-21,253;CL:0002076,3.53e-08,42;CL:0002139,2.54e-07,24;CL:0000223,4.17e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.54e-07;29 | |||
|ontology_enrichment_disease=DOID:305!8.62e-18!106;DOID:0050687!1.75e-13!143;DOID:14566!1.99e-11!239;DOID:162!4.24e-11!235;DOID:7!4.79e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.38e-17,106;DOID:0050687,2.14e-13,143;DOID:14566,1.60e-11,239;DOID:162,3.41e-11,235;DOID:7,5.46e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.50e-08!169;UBERON:0000925!2.50e-08!169;UBERON:0006595!2.50e-08!169;UBERON:0004921!4.29e-08!129;UBERON:0004185!4.29e-08!129;UBERON:0000077!8.49e-08!130;UBERON:0001007!9.34e-08!155;UBERON:0001555!9.34e-08!155;UBERON:0007026!9.34e-08!155;UBERON:0004923!6.57e-07!57 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.67e-07,160;UBERON:0000925,3.67e-07,160;UBERON:0006595,3.67e-07,160;UBERON:0001004,6.67e-07,74;UBERON:0004923,7.31e-07,66 | |||
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| ||
|short_description=p3@SLC38A1 | |||
}} | }} |
Latest revision as of 10:45, 18 September 2015
Short description: | p3@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC38A1_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000551506_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.80e-21 | 253 |
endo-epithelial cell | 3.53e-08 | 42 |
endothelial cell of vascular tree | 2.54e-07 | 24 |
endodermal cell | 4.17e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.67e-07 | 160 |
endoderm | 3.67e-07 | 160 |
presumptive endoderm | 3.67e-07 | 160 |
respiratory system | 6.67e-07 | 74 |
organ component layer | 7.31e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.38e-17 | 106 |
cell type cancer | 2.14e-13 | 143 |
disease of cellular proliferation | 1.60e-11 | 239 |
cancer | 3.41e-11 | 235 |
disease of anatomical entity | 5.46e-08 | 39 |