FFCP PHASE1:Hg19::chr1:12030713..12030734,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:12030713..12030734,+ | |||
|description=CAGE_peak_at_chr1:12030713..12030734,+ | |description=CAGE_peak_at_chr1:12030713..12030734,+ | ||
|id=chr1:12030713..12030734,+ | |id=chr1:12030713..12030734,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.02e-07!180 | |ontology_enrichment_celltype=CL:0000055!1.02e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000511;9.04e-11;1!CL:0002625;9.04e-11;1!CL:0002581;9.04e-11;1!CL:0000216;9.04e-11;1!CL:0000359;9.96e-11;32!CL:0002595;1.25e-08;5!CL:0000192;9.10e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.57e-11,1;CL:0002625,5.57e-11,1;CL:0000216,5.57e-11,1;CL:0002581,9.97e-11,1;CL:0000359,2.41e-10,32;CL:0002595,1.54e-08,5;CL:0000192,1.39e-07,43;CL:0000514,1.39e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000514;9.10e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;3.57e-11;1!DOID:10165;3.57e-11;1!DOID:1798;3.57e-11;1!DOID:178;9.04e-11;1!DOID:326;9.04e-11;1!DOID:3978;9.04e-11;1!DOID:3394;9.04e-11;1!DOID:5844;9.04e-11;1!DOID:3571;9.04e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,3.76e-11,1;DOID:10165,3.76e-11,1;DOID:1798,3.76e-11,1;DOID:178,6.14e-11,1;DOID:326,6.14e-11,1;DOID:3978,6.14e-11,1;DOID:3394,6.14e-11,1;DOID:5844,6.14e-11,1;DOID:3571,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001637!1.35e-07!42;UBERON:0003509!1.35e-07!42;UBERON:0004572!1.35e-07!42;UBERON:0002049!5.60e-07!79;UBERON:0007798!5.60e-07!79;UBERON:0000055!6.69e-07!69;UBERON:0001981!9.00e-07!60;UBERON:0007500!9.00e-07!60;UBERON:0004537!9.00e-07!60;UBERON:0006965!9.00e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;9.04e-11;1!UBERON:0001343;9.04e-11;1!UBERON:0004910;9.04e-11;1!UBERON:0004813;9.04e-11;1!UBERON:0003834;1.25e-08;5!UBERON:0001533;1.25e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,5.57e-11,1;UBERON:0001343,5.57e-11,1;UBERON:0004910,5.57e-11,1;UBERON:0005154,5.57e-11,1;UBERON:0005295,5.57e-11,1;UBERON:0004813,5.57e-11,1;UBERON:0005297,5.57e-11,1;UBERON:0005294,5.57e-11,1;UBERON:0010141,5.57e-11,1;UBERON:0005891,5.57e-11,1;UBERON:0003834,1.54e-08,5;UBERON:0001533,1.54e-08,5;UBERON:0001637,8.95e-08,42;UBERON:0003509,8.95e-08,42;UBERON:0004572,8.95e-08,42;UBERON:0004573,3.63e-07,33;UBERON:0004571,3.63e-07,33 | |||
|phase1_expression=0,1.49870366723688,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,1.80808358407193,0.730310090387373,0,0,0,0.626909442956176,0,0,0,0,0.164201178899891,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0.860509862246441,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0.919463387397059,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0,0,0,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.831883446123229,0.713715955188647,0.315404830067869,0,0,2.27407504055985,0,0.664225598535437,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0.308419387605311,0.177561725313127,0,1.55776328755086,0.116210378459959,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0.290033387828457,0,0.0890320356467374,0.495854746082934,0,0,0.10115778085555,0,1.5740617341532,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0.202182481573316,3.17020642346017,0,0,0.974853958525138,1.05650146756755,0,0.848432591722276,0,0,0,2.63070531152258,0,0,0.405820753925408,0.30982349809975,1.40847801266121,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0.41827123283581,0.0769502585037971,0.227884111694002,0,0.538545866458633,8.36584763799462,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,1.59743200399193,0.429226048136571,0.223171457441873,0,1.08089965062721,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0.35857467866569,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.915360273587694,0,0,0,0.159296767163702,0,0.310525913752519,0,0.79752514367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| |phase1_expression=0,1.49870366723688,0.140954404095971,0,0.446961094427288,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0.662794751455832,0.672325146451775,1.80808358407193,0.730310090387373,0,0,0,0.626909442956176,0,0,0,0,0.164201178899891,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0.56530794192401,0.838998872419812,0,0.417989933073621,0.258416759169329,0,0.33472061276467,0.402829317109147,0,0,0,0.81014194788176,0.17859945656816,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0.860509862246441,0,0,0,0.49333509683432,0.311211035399766,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0.250237039743928,0,0,0.919463387397059,0.150238058906597,0,0.179389635688862,0.213557388818567,0,0.300091096084402,0.309157587715317,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0.504867548488229,0,0,0,0.302256294682921,0,0,0,0,0,0.132529768321485,0,0.207322110030741,0,0,0,0.643240938192885,0,0.464367928031979,0,0.473227200159376,0.168584690078102,0.241011029883482,0.110293972732394,0.217879444092406,0.474541238222193,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0,0,0.234004265139238,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0,0,0,0,0,0.299918973546171,0,0,0,0.239624855491583,0,0,0.434343920002738,0,0,0.112085143993527,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0.831883446123229,0.713715955188647,0.315404830067869,0,0,2.27407504055985,0,0.664225598535437,0,0,0.195801157462741,0,0,0.215714200818617,0,0,0,0.30239029332968,0,0.153461973288062,0.561320188866147,0.384417447767103,0.511707249066704,0.321707842287215,1.48418066444991,0.308419387605311,0.177561725313127,0,1.55776328755086,0.116210378459959,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0.393373244878272,0,0.0770153371044148,0,1.46139224653261,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.183138929636687,0.082509499920588,0.574265537996172,0,1.6068392984416,0,0.308097234229289,0.15350367472613,0.137836572484531,0,0.290033387828457,0,0.0890320356467374,0.495854746082934,0,0,0.10115778085555,0,1.5740617341532,0,0.308033580176089,0.532306030317022,0,0.18532421910392,0.286249773483982,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0,0,0.202182481573316,3.17020642346017,0,0,0.974853958525138,1.05650146756755,0,0.848432591722276,0,0,0,2.63070531152258,0,0,0.405820753925408,0.30982349809975,1.40847801266121,0,0.196498082026242,0,0,0.211107635297664,0.329294892959902,0,0,0.192444225451024,0.670302275535787,0,0.282431402330337,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,0,0,0.295547618953547,0,0,0.41827123283581,0.0769502585037971,0.227884111694002,0,0.538545866458633,8.36584763799462,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0.335643173951685,0,0,0,0,0.282706142867882,0.216388639742091,0,0,0,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0.0979923974143777,0.174118413160805,0,0.171986032471617,0.0967563312890851,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0,0,0,0,0.136905378891993,0,0.429765441419957,0,0.279282401272254,0,0,1.59743200399193,0.429226048136571,0.223171457441873,0,1.08089965062721,0,0.157566364614447,0.0824158583811665,0.202210631562555,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0.35857467866569,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0.170388021785422,0,0.146552233678082,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0.915360273587694,0,0,0,0.159296767163702,0,0.310525913752519,0,0.79752514367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| ||
|short_description=p@chr1:12030713..12030734,+ | |short_description=p@chr1:12030713..12030734,+ | ||
}} | }} |
Latest revision as of 20:20, 27 July 2015
Short description: | p@chr1:12030713..12030734, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:12030713..12030734, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.57e-11 | 1 |
seminiferous tubule epithelial cell | 5.57e-11 | 1 |
Sertoli cell | 5.57e-11 | 1 |
perirenal preadipocyte | 9.97e-11 | 1 |
vascular associated smooth muscle cell | 2.41e-10 | 32 |
smooth muscle cell of the subclavian artery | 1.54e-08 | 5 |
smooth muscle cell | 1.39e-07 | 43 |
smooth muscle myoblast | 1.39e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 5.57e-11 | 1 |
seminiferous tubule of testis | 5.57e-11 | 1 |
epithelium of male gonad | 5.57e-11 | 1 |
epithelial cord | 5.57e-11 | 1 |
sex cord | 5.57e-11 | 1 |
seminiferous tubule epithelium | 5.57e-11 | 1 |
testis sex cord | 5.57e-11 | 1 |
genital ridge | 5.57e-11 | 1 |
primitive sex cord of indifferent gonad | 5.57e-11 | 1 |
coelomic epithelium | 5.57e-11 | 1 |
thoracic segment blood vessel | 1.54e-08 | 5 |
subclavian artery | 1.54e-08 | 5 |
artery | 8.95e-08 | 42 |
arterial blood vessel | 8.95e-08 | 42 |
arterial system | 8.95e-08 | 42 |
systemic artery | 3.63e-07 | 33 |
systemic arterial system | 3.63e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 3.76e-11 | 1 |
endocrine pancreas cancer | 3.76e-11 | 1 |
pancreatic endocrine carcinoma | 3.76e-11 | 1 |
vascular disease | 6.14e-11 | 1 |
ischemia | 6.14e-11 | 1 |
extrinsic cardiomyopathy | 6.14e-11 | 1 |
myocardial ischemia | 6.14e-11 | 1 |
myocardial infarction | 6.14e-11 | 1 |
liver cancer | 1.61e-10 | 1 |