FFCP PHASE1:Hg19::chr12:49687425..49687439,+: Difference between revisions
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|id=chr12:49687425..49687439,+
|short_description=p5@PRPH
|description=CAGE_peak_5_at_PRPH_5end
|association_with_transcript=-45bp_to_ENST00000257860_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5630 | |EntrezGene=5630 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9461 | |HGNC=9461 | ||
|TSSclassifier=strong | |||
|UniProt=P41219 | |UniProt=P41219 | ||
|association_with_transcript=-45bp_to_ENST00000257860_5end | |||
|cluster_id=chr12:49687425..49687439,+ | |||
|description=CAGE_peak_5_at_PRPH_5end | |||
|id=chr12:49687425..49687439,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000333;2.02e-15;5!CL:0002535;3.13e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.99e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.14e-09!22;DOID:2994!1.14e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.88e-19;1!DOID:169;5.10e-13;6!DOID:154;2.07e-10;2!DOID:3350;2.07e-10;2!DOID:4236;2.07e-10;2!DOID:1115;8.99e-09;20!DOID:171;3.50e-08;10!DOID:3095;5.01e-08;22!DOID:2994;5.01e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.56e-19,1;DOID:169,4.52e-13,6;DOID:3350,1.89e-10,2;DOID:154,2.07e-10,2;DOID:4236,2.07e-10,2;DOID:1115,9.48e-09,20;DOID:171,3.25e-08,10;DOID:3095,4.89e-08,22;DOID:2994,4.89e-08,22;DOID:0050687,1.36e-07,143;DOID:162,6.08e-07,235;DOID:14566,8.82e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.86e-07!5;UBERON:0002410!1.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;2.02e-15;5!UBERON:0002410;2.02e-15;5!UBERON:0006955;3.13e-10;2!UBERON:0004801;3.13e-10;2!UBERON:0000010;5.42e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.75e-15,5;UBERON:0002410,1.75e-15,5;UBERON:0006955,2.99e-10,2;UBERON:0004801,2.99e-10,2;UBERON:0000010,5.00e-09,8 | |||
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| ||
|short_description=p5@PRPH | |||
}} | }} |
Latest revision as of 16:08, 18 September 2015
Short description: | p5@PRPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PRPH_5end |
Coexpression cluster: | NA |
Association with transcript: | -45bp_to_ENST00000257860_5end |
EntrezGene: | PRPH |
HGNC: | 9461 |
UniProt: | P41219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.99e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.75e-15 | 5 |
autonomic nervous system | 1.75e-15 | 5 |
uterine epithelium | 2.99e-10 | 2 |
cervix epithelium | 2.99e-10 | 2 |
peripheral nervous system | 5.00e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.56e-19 | 1 |
neuroendocrine tumor | 4.52e-13 | 6 |
mesenchymal cell neoplasm | 1.89e-10 | 2 |
mixed cell type cancer | 2.07e-10 | 2 |
carcinosarcoma | 2.07e-10 | 2 |
sarcoma | 9.48e-09 | 20 |
neuroectodermal tumor | 3.25e-08 | 10 |
germ cell and embryonal cancer | 4.89e-08 | 22 |
germ cell cancer | 4.89e-08 | 22 |
cell type cancer | 1.36e-07 | 143 |
cancer | 6.08e-07 | 235 |
disease of cellular proliferation | 8.82e-07 | 239 |