FFCP PHASE1:Hg19::chr1:156123108..156123151,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64218 | |EntrezGene=64218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10729 | |HGNC=10729 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H3S1 | |UniProt=Q9H3S1 | ||
|association_with_transcript=-166bp_to_ENST00000368285_5end | |association_with_transcript=-166bp_to_ENST00000368285_5end | ||
|cluster_id=chr1:156123108..156123151,+ | |||
|coexpression_cluster_id=C61 | |||
|description=CAGE_peak_18_at_SEMA4A_5end | |description=CAGE_peak_18_at_SEMA4A_5end | ||
|id=chr1:156123108..156123151,+ | |id=chr1:156123108..156123151,+ | ||
|ontology_enrichment_celltype=CL:0000453!6.41e-45!5;CL:0000990!5.87e-25!8;CL:0000451!2.08e-20!10;CL:0001014!5.88e-19!2;CL:0001016!5.88e-19!2;CL:0000945!1.65e-12!24;CL:0000826!1.65e-12!24;CL:0000988!6.29e-11!182;CL:0000738!7.99e-10!140;CL:0000838!1.12e-09!52;CL:0000542!1.78e-09!53;CL:0000051!1.78e-09!53;CL:0002032!2.53e-09!165;CL:0000837!2.53e-09!165;CL:0000037!7.69e-09!172;CL:0000566!7.69e-09!172;CL:0000840!6.65e-07!5;CL:0001029!6.65e-07!5 | |ontology_enrichment_celltype=CL:0000453!6.41e-45!5;CL:0000990!5.87e-25!8;CL:0000451!2.08e-20!10;CL:0001014!5.88e-19!2;CL:0001016!5.88e-19!2;CL:0000945!1.65e-12!24;CL:0000826!1.65e-12!24;CL:0000988!6.29e-11!182;CL:0000738!7.99e-10!140;CL:0000838!1.12e-09!52;CL:0000542!1.78e-09!53;CL:0000051!1.78e-09!53;CL:0002032!2.53e-09!165;CL:0000837!2.53e-09!165;CL:0000037!7.69e-09!172;CL:0000566!7.69e-09!172;CL:0000840!6.65e-07!5;CL:0001029!6.65e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.46e-125;5!CL:0000990;2.82e-70;8!CL:0000451;1.07e-57;10!CL:0001014;5.15e-21;2!CL:0001016;5.15e-21;2!CL:0000840;6.55e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.24e-125,5;CL:0000990,2.58e-70,8;CL:0000451,9.98e-58,10;CL:0001014,4.66e-21,2;CL:0001016,4.66e-21,2;CL:0000840,6.34e-08,5;CL:0001029,6.34e-08,5;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!2.16e-10!1;DOID:0060061!2.16e-10!1;DOID:8691!2.16e-10!1;DOID:630!2.59e-10!1;DOID:0050177!2.59e-10!1;DOID:0050427!2.59e-10!1;DOID:3369!3.10e-10!1 | |ontology_enrichment_disease=DOID:0060060!2.16e-10!1;DOID:0060061!2.16e-10!1;DOID:8691!2.16e-10!1;DOID:630!2.59e-10!1;DOID:0050177!2.59e-10!1;DOID:0050427!2.59e-10!1;DOID:3369!3.10e-10!1 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.81e-40;1!DOID:0060061;1.81e-40;1!DOID:8691;1.81e-40;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.21e-40,1;DOID:0060061,2.21e-40,1;DOID:8691,2.21e-40,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p18@SEMA4A | |short_description=p18@SEMA4A | ||
}} | }} |
Latest revision as of 15:13, 17 September 2015
Short description: | p18@SEMA4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SEMA4A_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | -166bp_to_ENST00000368285_5end |
EntrezGene: | SEMA4A |
HGNC: | 10729 |
UniProt: | Q9H3S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.24e-125 | 5 |
conventional dendritic cell | 2.58e-70 | 8 |
dendritic cell | 9.98e-58 | 10 |
CD1a-positive Langerhans cell | 4.66e-21 | 2 |
immature CD1a-positive Langerhans cell | 4.66e-21 | 2 |
immature conventional dendritic cell | 6.34e-08 | 5 |
common dendritic progenitor | 6.34e-08 | 5 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.21e-40 | 1 |
cutaneous T cell lymphoma | 2.21e-40 | 1 |
mycosis fungoides | 2.21e-40 | 1 |