FFCP PHASE1:Hg19::chr1:156721389..156721400,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3068 | |EntrezGene=3068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4856 | |HGNC=4856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000537739_5end | |association_with_transcript=0bp_to_ENST00000537739_5end | ||
|cluster_id=chr1:156721389..156721400,- | |||
|coexpression_cluster_id=C3883 | |||
|description=CAGE_peak_4_at_HDGF_5end | |description=CAGE_peak_4_at_HDGF_5end | ||
|id=chr1:156721389..156721400,- | |id=chr1:156721389..156721400,- | ||
|ontology_enrichment_celltype=CL:0000066!1.78e-20!254;CL:0002321!1.13e-15!248;CL:0000220!1.25e-15!246;CL:0000055!1.44e-12!180;CL:0000548!6.27e-10!679;CL:0000004!6.27e-10!679;CL:0000255!6.27e-10!679;CL:0000012!3.14e-09!682;CL:0000076!3.82e-08!62;CL:0000222!8.41e-08!119;CL:0000221!9.84e-07!71 | |ontology_enrichment_celltype=CL:0000066!1.78e-20!254;CL:0002321!1.13e-15!248;CL:0000220!1.25e-15!246;CL:0000055!1.44e-12!180;CL:0000548!6.27e-10!679;CL:0000004!6.27e-10!679;CL:0000255!6.27e-10!679;CL:0000012!3.14e-09!682;CL:0000076!3.82e-08!62;CL:0000222!8.41e-08!119;CL:0000221!9.84e-07!71 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.87e-20,253;CL:0002321,3.03e-16,250;CL:0000076,2.26e-08,63;CL:0000222,2.58e-08,121;CL:0000221,7.05e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.29e-14!235;DOID:14566!4.26e-14!239;DOID:0050687!3.65e-11!143;DOID:305!4.00e-10!106 | |ontology_enrichment_disease=DOID:162!2.29e-14!235;DOID:14566!4.26e-14!239;DOID:0050687!3.65e-11!143;DOID:305!4.00e-10!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.87e-14,235;DOID:14566,6.10e-14,239;DOID:0050687,3.73e-11,143;DOID:305,3.42e-10,106 | |||
|ontology_enrichment_uberon=UBERON:0003104!1.20e-09!238;UBERON:0009142!1.20e-09!238;UBERON:0000119!4.47e-09!312;UBERON:0000481!9.82e-09!347;UBERON:0000483!2.33e-08!309;UBERON:0005256!2.73e-07!143;UBERON:0002100!3.56e-07!216 | |ontology_enrichment_uberon=UBERON:0003104!1.20e-09!238;UBERON:0009142!1.20e-09!238;UBERON:0000119!4.47e-09!312;UBERON:0000481!9.82e-09!347;UBERON:0000483!2.33e-08!309;UBERON:0005256!2.73e-07!143;UBERON:0002100!3.56e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,1.21e-08,309;UBERON:0000483,6.07e-08,306;UBERON:0000490,1.52e-07,148 | |||
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| ||
|short_description=p4@HDGF | |short_description=p4@HDGF | ||
}} | }} |
Latest revision as of 17:52, 17 September 2015
Short description: | p4@HDGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HDGF_5end |
Coexpression cluster: | C3883_Reticulocytes_teratocarcinoma_Renal_transitionalcell_mesothelioma_Tracheal_Alveolar |
Association with transcript: | 0bp_to_ENST00000537739_5end |
EntrezGene: | HDGF |
HGNC: | 4856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.87e-20 | 253 |
embryonic cell | 3.03e-16 | 250 |
squamous epithelial cell | 2.26e-08 | 63 |
mesodermal cell | 2.58e-08 | 121 |
ectodermal cell | 7.05e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cell layer | 1.21e-08 | 309 |
epithelium | 6.07e-08 | 306 |
unilaminar epithelium | 1.52e-07 | 148 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.87e-14 | 235 |
disease of cellular proliferation | 6.10e-14 | 239 |
cell type cancer | 3.73e-11 | 143 |
carcinoma | 3.42e-10 | 106 |