FFCP PHASE1:Hg19::chr12:54380036..54380091,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:54380036..54380091,+
|short_description=p4@HOXC10
|description=CAGE_peak_4_at_HOXC10_5end
|association_with_transcript=-30bp_to_ENST00000514415_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3226 | |EntrezGene=3226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5122 | |HGNC=5122 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-30bp_to_ENST00000514415_5end | |||
|cluster_id=chr12:54380036..54380091,+ | |||
|description=CAGE_peak_4_at_HOXC10_5end | |||
|id=chr12:54380036..54380091,+ | |||
|ontology_enrichment_celltype=CL:0002570!9.12e-08!8;CL:0000136!5.13e-07!15;CL:0000153!6.58e-07!9;CL:0000447!6.58e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002570;1.21e-10;8!CL:0000153;4.01e-09;9!CL:0000447;4.01e-09;9!CL:0002540;5.37e-09;6!CL:0000680;7.08e-09;7!CL:0000138;6.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,1.24e-10,8;CL:0000153,2.21e-09,9;CL:0000447,2.21e-09,9;CL:0002540,5.84e-09,6;CL:0000058,5.43e-07,6;CL:0000138,5.43e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.23e-13!143;DOID:162!5.04e-10!235;DOID:14566!5.57e-10!239;DOID:305!3.32e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.81e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.36e-10!9;UBERON:0001013!1.55e-09!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.38e-14;9!UBERON:0001557;3.38e-14;9!UBERON:0001013;2.16e-13;14!UBERON:0001134;9.12e-08;16!UBERON:0002036;9.12e-08;16!UBERON:0002072;3.60e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.50e-14,9;UBERON:0001013,1.70e-13,14;UBERON:0002072,3.90e-07,5 | |||
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| ||
|short_description=p4@HOXC10 | |||
}} | }} |
Latest revision as of 04:38, 19 September 2015
Short description: | p4@HOXC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXC10_5end |
Coexpression cluster: | NA |
Association with transcript: | -30bp_to_ENST00000514415_5end |
EntrezGene: | HOXC10 |
HGNC: | 5122 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 1.24e-10 | 8 |
GAG secreting cell | 2.21e-09 | 9 |
carbohydrate secreting cell | 2.21e-09 | 9 |
mesenchymal stem cell of the bone marrow | 5.84e-09 | 6 |
chondroblast | 5.43e-07 | 6 |
chondrocyte | 5.43e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.50e-14 | 9 |
adipose tissue | 1.70e-13 | 14 |
hypodermis | 3.90e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.81e-09 | 143 |