FFCP PHASE1:Hg19::chr12:56848437..56848442,-: Difference between revisions
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|id=chr12:56848437..56848442,-
|short_description=p1@MIP
|description=CAGE_peak_1_at_MIP_5end
|association_with_transcript=-2bp_to_NM_012064_5end
|EntrezGene=4284
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4284 | |EntrezGene=4284 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7103 | |HGNC=7103 | ||
|TSSclassifier=strong | |||
|UniProt=P30301 | |UniProt=P30301 | ||
|association_with_transcript=-2bp_to_NM_012064_5end | |||
|cluster_id=chr12:56848437..56848442,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_1_at_MIP_5end | |||
|id=chr12:56848437..56848442,- | |||
|ontology_enrichment_celltype=CL:0000306!2.37e-29!4;CL:0002222!2.37e-29!4;CL:0002224!2.37e-29!4;CL:0002150!1.09e-10!3;CL:0000861!1.09e-10!3;CL:0000075!3.47e-10!27;CL:0000325!2.98e-07!39;CL:0002322!6.04e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000306;7.14e-26;4!CL:0002222;7.14e-26;4!CL:0002224;7.14e-26;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,7.14e-26,4;CL:0002222,7.14e-26,4;CL:0002224,7.14e-26,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0010077!2.37e-29!4;UBERON:0005389!2.37e-29!4;UBERON:0000484!2.37e-29!4;UBERON:0002546!2.37e-29!4;UBERON:0000965!2.37e-29!4;UBERON:0001803!2.37e-29!4;UBERON:0003073!2.37e-29!4;UBERON:0005426!2.37e-29!4;UBERON:0000970!3.74e-23!20;UBERON:0002104!4.41e-22!21;UBERON:0000020!3.23e-20!23;UBERON:0001032!2.12e-19!24;UBERON:0004456!2.12e-19!24;UBERON:0000076!3.06e-15!8;UBERON:0000019!3.96e-14!19;UBERON:0000047!3.96e-14!19;UBERON:0004088!3.96e-14!19;UBERON:0003072!3.96e-14!19;UBERON:0003071!3.96e-14!19;UBERON:0004128!3.96e-14!19;UBERON:0001456!7.43e-13!21;UBERON:0007625!2.30e-11!11;UBERON:0005085!1.66e-09!29;UBERON:0001801!3.88e-09!14;UBERON:0000966!6.77e-07!5;UBERON:0005388!6.77e-07!5;UBERON:0001802!6.77e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0010077;7.14e-26;4!UBERON:0005389;7.14e-26;4!UBERON:0000484;7.14e-26;4!UBERON:0000965;7.14e-26;4!UBERON:0001803;7.14e-26;4!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0007625;2.37e-10;11!UBERON:0001801;2.00e-08;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010077,7.14e-26,4;UBERON:0005389,7.14e-26,4;UBERON:0000484,7.14e-26,4;UBERON:0002546,7.14e-26,4;UBERON:0000965,7.14e-26,4;UBERON:0001803,7.14e-26,4;UBERON:0003073,7.14e-26,4;UBERON:0005426,7.14e-26,4;UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24;UBERON:0000076,1.07e-13,8;UBERON:0007625,2.37e-10,11;UBERON:0001801,2.00e-08,14 | |||
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|short_description=p1@MIP | |||
}} | }} |
Latest revision as of 11:04, 19 September 2015
Short description: | p1@MIP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIP_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | -2bp_to_NM_012064_5end |
EntrezGene: | MIP |
HGNC: | 7103 |
UniProt: | P30301 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 7.14e-26 | 4 |
vertebrate lens cell | 7.14e-26 | 4 |
lens epithelial cell | 7.14e-26 | 4 |
Ontology term | p-value | n |
---|---|---|
cuboidal epithelium | 7.14e-26 | 4 |
transparent eye structure | 7.14e-26 | 4 |
simple cuboidal epithelium | 7.14e-26 | 4 |
cranial placode | 7.14e-26 | 4 |
lens of camera-type eye | 7.14e-26 | 4 |
epithelium of lens | 7.14e-26 | 4 |
lens placode | 7.14e-26 | 4 |
lens vesicle | 7.14e-26 | 4 |
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |
external ectoderm | 1.07e-13 | 8 |
pigment epithelium of eye | 2.37e-10 | 11 |
anterior segment of eyeball | 2.00e-08 | 14 |