FFCP PHASE1:Hg19::chr4:71522976..71522993,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:71522976..71522993,- | |||
|coexpression_cluster_id=C1273 | |||
|description=CAGE_peak_at_chr4:71522976..71522993,- | |description=CAGE_peak_at_chr4:71522976..71522993,- | ||
|id=chr4:71522976..71522993,- | |id=chr4:71522976..71522993,- | ||
|ontology_enrichment_celltype=CL:0000945!2.56e-38!24;CL:0000826!2.56e-38!24;CL:0000236!6.97e-27!14;CL:0000542!1.27e-15!53;CL:0000051!1.27e-15!53;CL:0000838!2.54e-14!52;CL:0002087!7.58e-09!119;CL:0000738!1.68e-08!140;CL:0000784!5.09e-08!3 | |ontology_enrichment_celltype=CL:0000945!2.56e-38!24;CL:0000826!2.56e-38!24;CL:0000236!6.97e-27!14;CL:0000542!1.27e-15!53;CL:0000051!1.27e-15!53;CL:0000838!2.54e-14!52;CL:0002087!7.58e-09!119;CL:0000738!1.68e-08!140;CL:0000784!5.09e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;7.16e-39;13!CL:0000945;1.30e-37;24!CL:0000784;1.25e-13;3!CL:0000542;6.69e-13;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.28e-43,14;CL:0000945,1.07e-37,24;CL:0000826,1.07e-37,24;CL:0000542,1.75e-17,53;CL:0000051,1.75e-17,53;CL:0000838,1.62e-15,52;CL:0000784,1.18e-13,3;CL:0000785,5.42e-10,2;CL:0000955,5.42e-10,2;CL:0000818,5.42e-10,2;CL:0000954,5.42e-10,2;CL:0000816,5.42e-10,2;CL:0000738,4.13e-07,136;CL:0002087,4.77e-07,115;CL:0000817,6.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;6.69e-13;53!CL:0000954;5.79e-10;2!UBERON:0004872;9.50e-10;7!UBERON:0006965;3.36e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.43e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.49e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.65e-17!115;UBERON:0000178!1.07e-07!15;UBERON:0000179!1.07e-07!15;UBERON:0000463!1.07e-07!15;UBERON:0004177!3.05e-07!7;UBERON:0002106!3.59e-07!3;UBERON:0004854!3.59e-07!3;UBERON:0009034!3.59e-07!3;UBERON:0002095!3.59e-07!3;UBERON:0004782!3.59e-07!3;UBERON:0003281!3.59e-07!3;UBERON:0009664!3.59e-07!3;UBERON:0002296!3.59e-07!3;UBERON:0005602!3.59e-07!3;UBERON:0001179!3.59e-07!3;UBERON:0006293!3.59e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;2.64e-10;2!UBERON:0004921;1.73e-09;33!UBERON:0001044;3.53e-07;6!UBERON:0003293;3.53e-07;6!UBERON:0003294;3.53e-07;6!UBERON:0010047;3.53e-07;6!UBERON:0003408;3.53e-07;6!UBERON:0000167;3.53e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.25e-17,114;UBERON:0001829,2.77e-10,2;UBERON:0005409,2.10e-07,25;UBERON:0001044,3.35e-07,6;UBERON:0003293,3.35e-07,6;UBERON:0003294,3.35e-07,6;UBERON:0010047,3.35e-07,6;UBERON:0000167,3.35e-07,6 | |||
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| ||
|short_description=p@chr4:71522976..71522993,- | |short_description=p@chr4:71522976..71522993,- | ||
}} | }} |
Latest revision as of 06:24, 30 July 2015
Short description: | p@chr4:71522976..71522993, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:71522976..71522993, - |
Coexpression cluster: | C1273_colon_CD19_small_Dendritic_submaxillary_appendix_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.28e-43 | 14 |
lymphocyte of B lineage | 1.07e-37 | 24 |
pro-B cell | 1.07e-37 | 24 |
lymphocyte | 1.75e-17 | 53 |
common lymphoid progenitor | 1.75e-17 | 53 |
lymphoid lineage restricted progenitor cell | 1.62e-15 | 52 |
plasmacytoid dendritic cell | 1.18e-13 | 3 |
mature B cell | 5.42e-10 | 2 |
pre-B-II cell | 5.42e-10 | 2 |
transitional stage B cell | 5.42e-10 | 2 |
small pre-B-II cell | 5.42e-10 | 2 |
immature B cell | 5.42e-10 | 2 |
leukocyte | 4.13e-07 | 136 |
nongranular leukocyte | 4.77e-07 | 115 |
precursor B cell | 6.36e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.25e-17 | 114 |
major salivary gland | 2.77e-10 | 2 |
gastrointestinal system | 2.10e-07 | 25 |
saliva-secreting gland | 3.35e-07 | 6 |
gland of oral region | 3.35e-07 | 6 |
gland of foregut | 3.35e-07 | 6 |
oral gland | 3.35e-07 | 6 |
oral cavity | 3.35e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.49e-07 | 10 |