FFCP PHASE1:Hg19::chr1:205225319..205225338,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9911 | |EntrezGene=9911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24239 | |HGNC=24239 | ||
|TSSclassifier=strong | |||
|UniProt=G5E963 | |UniProt=G5E963 | ||
|association_with_transcript=0bp_to_ENST00000329800,ENST00000468846,uc001hcb.1_5end | |association_with_transcript=0bp_to_ENST00000329800,ENST00000468846,uc001hcb.1_5end | ||
|cluster_id=chr1:205225319..205225338,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_2_at_TMCC2_5end | |description=CAGE_peak_2_at_TMCC2_5end | ||
|id=chr1:205225319..205225338,+ | |id=chr1:205225319..205225338,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;9.32e-10;2!CL:0000558;9.32e-10;2!CL:0000097;8.45e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.33e-10,2;CL:0000765,9.33e-10,2;CL:0000050,9.33e-10,2;CL:0000038,9.33e-10,2;CL:0000558,9.33e-10,2;CL:0000547,9.33e-10,2;CL:0000549,9.33e-10,2;CL:0000550,9.33e-10,2;CL:0000552,9.33e-10,2;CL:0000097,9.17e-08,5;CL:0002028,9.17e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.16e-09;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-24!115;UBERON:0000178!1.29e-22!15;UBERON:0000179!1.29e-22!15;UBERON:0000463!1.29e-22!15;UBERON:0004151!7.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.56e-21;15!UBERON:0000179;4.56e-21;15!UBERON:0000463;4.56e-21;15!UBERON:0000922;1.64e-15;49!UBERON:0002390;1.02e-14;32!UBERON:0000341;4.60e-09;2!UBERON:0004177;1.09e-07;5!UBERON:0005057;1.09e-07;5!UBERON:0002193;2.79e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.62e-21,15;UBERON:0000179,4.62e-21,15;UBERON:0000463,4.62e-21,15;UBERON:0000341,4.60e-09,2;UBERON:0007023,3.53e-07,114 | |||
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| ||
|short_description=p2@TMCC2 | |short_description=p2@TMCC2 | ||
}} | }} |
Latest revision as of 02:31, 20 September 2015
Short description: | p2@TMCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMCC2_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000329800, ENST00000468846, uc001hcb.1_5end |
EntrezGene: | TMCC2 |
HGNC: | 24239 |
UniProt: | G5E963 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.33e-10 | 2 |
erythroblast | 9.33e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 9.33e-10 | 2 |
erythroid progenitor cell | 9.33e-10 | 2 |
reticulocyte | 9.33e-10 | 2 |
proerythroblast | 9.33e-10 | 2 |
basophilic erythroblast | 9.33e-10 | 2 |
polychromatophilic erythroblast | 9.33e-10 | 2 |
orthochromatic erythroblast | 9.33e-10 | 2 |
mast cell | 9.17e-08 | 5 |
basophil mast progenitor cell | 9.17e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
blood | 4.62e-21 | 15 |
haemolymphatic fluid | 4.62e-21 | 15 |
organism substance | 4.62e-21 | 15 |
throat | 4.60e-09 | 2 |
adult organism | 3.53e-07 | 114 |