FFCP PHASE1:Hg19::chr5:140053152..140053174,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=373863 | |EntrezGene=373863 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23799 | |HGNC=23799 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IYX4 | |UniProt=Q8IYX4 | ||
|association_with_transcript=0bp_to_ENST00000542735,NM_194249,uc003lgt.2_5end | |association_with_transcript=0bp_to_ENST00000542735,NM_194249,uc003lgt.2_5end | ||
|cluster_id=chr5:140053152..140053174,- | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_1_at_DND1_5end | |description=CAGE_peak_1_at_DND1_5end | ||
|id=chr5:140053152..140053174,- | |id=chr5:140053152..140053174,- | ||
|ontology_enrichment_celltype=CL:0002322!4.95e-42!5;CL:0000039!3.60e-20!7;CL:0000586!3.60e-20!7;CL:0002379!1.25e-09!1;CL:0002336!2.26e-09!1;CL:0002261!2.26e-09!1;CL:0002170!2.26e-09!1;CL:0000148!4.02e-08!10;CL:0000541!4.02e-08!10;CL:0000710!6.94e-07!20 | |ontology_enrichment_celltype=CL:0002322!4.95e-42!5;CL:0000039!3.60e-20!7;CL:0000586!3.60e-20!7;CL:0002379!1.25e-09!1;CL:0002336!2.26e-09!1;CL:0002261!2.26e-09!1;CL:0002170!2.26e-09!1;CL:0000148!4.02e-08!10;CL:0000541!4.02e-08!10;CL:0000710!6.94e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0000039;3.52e-90;7!CL:0000586;3.52e-90;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.52e-90,7;CL:0000586,3.52e-90,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.85e-98;10!UBERON:0005564;2.85e-98;10!UBERON:0006603;5.55e-09;65 | |||
|ontology_enrichment_disease=DOID:3095!1.04e-09!22;DOID:2994!1.04e-09!22;DOID:3620!1.25e-09!1;DOID:3565!1.25e-09!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.19e-29;22!DOID:2994;2.19e-29;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.19e-29,22;DOID:2994,2.19e-29,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.53e-38!8;UBERON:0003135!6.18e-28!11;UBERON:0000991!1.99e-14!21;UBERON:0009196!1.99e-14!21;UBERON:0009117!1.99e-14!21;UBERON:0005564!1.99e-14!21;UBERON:0004176!9.45e-14!22;UBERON:0003101!9.45e-14!22;UBERON:0000079!9.45e-14!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.50e-122;8!UBERON:0003135;1.93e-89;11!UBERON:0000991;2.41e-47;21!UBERON:0003101;3.09e-45;22!UBERON:0000079;3.09e-45;22!UBERON:0002323;6.79e-18;45!UBERON:0003133;9.81e-17;44!UBERON:0002553;3.36e-12;52!UBERON:0000922;6.14e-11;49!UBERON:0005156;8.71e-11;59!UBERON:0000990;8.71e-11;59!UBERON:0004458;1.70e-09;48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.50e-122,8;UBERON:0003135,1.93e-89,11;UBERON:0000991,2.41e-47,21;UBERON:0009196,2.41e-47,21;UBERON:0009117,2.41e-47,21;UBERON:0005564,2.41e-47,21;UBERON:0004176,3.09e-45,22;UBERON:0003101,3.09e-45,22;UBERON:0000079,3.09e-45,22;UBERON:0002323,4.33e-22,46;UBERON:0003133,3.34e-21,48;UBERON:0004458,8.73e-21,49;UBERON:0003886,6.22e-19,54;UBERON:0005156,2.16e-17,59;UBERON:0000990,2.16e-17,59;UBERON:0002553,7.61e-17,61;UBERON:0001048,8.66e-07,160 | |||
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|short_description=p1@DND1 | |short_description=p1@DND1 | ||
}} | }} |
Latest revision as of 02:41, 25 September 2015
Short description: | p1@DND1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_DND1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | 0bp_to_ENST00000542735, NM_194249, uc003lgt.2_5end |
EntrezGene: | DND1 |
HGNC: | 23799 |
UniProt: | Q8IYX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.52e-90 | 7 |
germ cell | 3.52e-90 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 1.50e-122 | 8 |
male reproductive organ | 1.93e-89 | 11 |
gonad | 2.41e-47 | 21 |
indifferent external genitalia | 2.41e-47 | 21 |
indifferent gonad | 2.41e-47 | 21 |
gonad primordium | 2.41e-47 | 21 |
external genitalia | 3.09e-45 | 22 |
male organism | 3.09e-45 | 22 |
male reproductive system | 3.09e-45 | 22 |
body cavity | 4.33e-22 | 46 |
reproductive organ | 3.34e-21 | 48 |
body cavity or lining | 8.73e-21 | 49 |
body cavity precursor | 6.22e-19 | 54 |
reproductive structure | 2.16e-17 | 59 |
reproductive system | 2.16e-17 | 59 |
anatomical cavity | 7.61e-17 | 61 |
primordium | 8.66e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.19e-29 | 22 |
germ cell cancer | 2.19e-29 | 22 |