FFCP PHASE1:Hg19::chr5:167246664..167246691,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:167246664..167246691,+ | |||
|coexpression_cluster_id=C592 | |||
|description=CAGE_peak_at_chr5:167246664..167246691,+ | |description=CAGE_peak_at_chr5:167246664..167246691,+ | ||
|id=chr5:167246664..167246691,+ | |id=chr5:167246664..167246691,+ | ||
|ontology_enrichment_celltype=CL:0002159!2.57e-15!13;CL:0002368!3.41e-15!13;CL:0002076!3.12e-14!43;CL:0000223!7.00e-10!59;CL:0000244!1.95e-08!4;CL:0000731!1.95e-08!4;CL:0002202!3.25e-08!9;CL:0002632!3.25e-08!9;CL:0002077!5.91e-08!33;CL:0002621!1.96e-07!3;CL:0000068!2.40e-07!3;CL:0000069!2.40e-07!3;CL:0000307!2.40e-07!3;CL:0000377!2.40e-07!3;CL:0002166!2.45e-07!3;CL:0002328!3.67e-07!3;CL:0000362!7.51e-07!8 | |ontology_enrichment_celltype=CL:0002159!2.57e-15!13;CL:0002368!3.41e-15!13;CL:0002076!3.12e-14!43;CL:0000223!7.00e-10!59;CL:0000244!1.95e-08!4;CL:0000731!1.95e-08!4;CL:0002202!3.25e-08!9;CL:0002632!3.25e-08!9;CL:0002077!5.91e-08!33;CL:0002621!1.96e-07!3;CL:0000068!2.40e-07!3;CL:0000069!2.40e-07!3;CL:0000307!2.40e-07!3;CL:0000377!2.40e-07!3;CL:0002166!2.45e-07!3;CL:0002328!3.67e-07!3;CL:0000362!7.51e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002368;4.49e-28;13!CL:0002159;3.93e-26;14!CL:0002076;1.23e-22;42!CL:0002202;7.33e-15;9!CL:0002632;7.33e-15;9!CL:0000244;2.18e-14;4!CL:0000731;2.18e-14;4!CL:0002077;1.36e-13;34!CL:0002621;1.56e-12;3!CL:0000307;2.28e-12;3!CL:0002166;2.33e-12;3!CL:0002328;5.11e-12;3!CL:0000362;7.09e-11;9!CL:0000240;1.56e-10;6!CL:0000311;1.56e-10;6!CL:0000079;1.56e-10;6!CL:0000237;1.56e-10;6!CL:0000317;4.01e-09;2!CL:1000448;4.01e-09;2!CL:0002308;4.01e-09;2!CL:0002140;4.01e-09;2!CL:0000575;1.13e-08;2!CL:0002251;3.15e-08;20!CL:0000312;1.22e-07;5!CL:0000622;2.12e-07;5!CL:0000453;4.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,4.44e-28,13;CL:0002076,7.10e-28,42;CL:0002159,3.88e-26,14;CL:0000223,6.08e-21,58;CL:0002077,4.08e-16,34;CL:0000066,2.48e-15,253;CL:0002202,7.24e-15,9;CL:0002632,7.24e-15,9;CL:0000244,2.14e-14,4;CL:0000731,2.14e-14,4;CL:0002621,1.56e-12,3;CL:0000068,2.28e-12,3;CL:0000069,2.28e-12,3;CL:0000307,2.28e-12,3;CL:0000377,2.28e-12,3;CL:0002166,2.37e-12,3;CL:0002328,5.02e-12,3;CL:0000362,7.02e-11,9;CL:0000240,1.54e-10,6;CL:0000311,1.54e-10,6;CL:0000079,1.54e-10,6;CL:0000237,1.54e-10,6;CL:0000036,1.54e-10,6;CL:0000357,1.54e-10,6;CL:0000114,1.54e-10,6;CL:0000317,4.09e-09,2;CL:1000448,4.09e-09,2;CL:0002308,4.09e-09,2;CL:0002140,4.09e-09,2;CL:0002321,4.52e-09,250;CL:0000575,1.11e-08,2;CL:0002251,3.22e-08,20;CL:0000312,1.20e-07,5;CL:0000622,2.21e-07,5;CL:0000453,4.49e-07,5;CL:0000221,6.79e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000377;2.28e-12;3!CL:0000223;3.02e-12;58!CL:0000357;1.56e-10;6!CL:0000114;1.56e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!2.14e-11!95;UBERON:0001004!1.67e-09!72;UBERON:0000065!1.13e-07!53;UBERON:0001949!1.96e-07!3;UBERON:0004119!2.42e-07!169;UBERON:0000925!2.42e-07!169;UBERON:0006595!2.42e-07!169;UBERON:0004815!3.67e-07!3;UBERON:0002031!3.67e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.01e-14;12!UBERON:0001949;1.56e-12;3!UBERON:0004815;5.11e-12;3!UBERON:0002031;5.11e-12;3!UBERON:0000365;1.56e-11;5!UBERON:0005910;1.27e-09;6!UBERON:0001708;2.28e-09;4!UBERON:0008895;2.28e-09;4!UBERON:0002419;4.01e-09;2!UBERON:0007771;4.01e-09;2!UBERON:0003297;4.01e-09;2!UBERON:0001821;4.01e-09;2!UBERON:0003487;4.01e-09;2!UBERON:0001820;4.01e-09;2!UBERON:0007196;1.25e-08;15!UBERON:0001558;1.25e-08;15!UBERON:0002370;1.22e-07;2!UBERON:0005058;1.22e-07;2!UBERON:0009113;1.22e-07;2!UBERON:0011159;1.44e-07;5!UBERON:0002185;2.28e-07;5!UBERON:0003729;4.16e-07;13!UBERON:0000165;4.22e-07;28!UBERON:0005911;7.90e-07;36!UBERON:0010371;8.73e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.73e-13,74;UBERON:0004119,5.50e-13,160;UBERON:0000925,5.50e-13,160;UBERON:0006595,5.50e-13,160;UBERON:0001949,1.56e-12,3;UBERON:0004815,5.02e-12,3;UBERON:0002031,5.02e-12,3;UBERON:0000365,1.54e-11,5;UBERON:0000065,2.45e-10,54;UBERON:0003102,3.05e-10,99;UBERON:0000153,7.97e-10,62;UBERON:0007811,7.97e-10,62;UBERON:0005910,1.25e-09,6;UBERON:0001708,2.31e-09,4;UBERON:0008895,2.31e-09,4;UBERON:0002419,4.09e-09,2;UBERON:0007771,4.09e-09,2;UBERON:0003297,4.09e-09,2;UBERON:0001821,4.09e-09,2;UBERON:0003487,4.09e-09,2;UBERON:0001820,4.09e-09,2;UBERON:0005089,4.09e-09,2;UBERON:0005088,4.09e-09,2;UBERON:0007196,1.24e-08,15;UBERON:0001558,1.24e-08,15;UBERON:0000033,2.42e-08,56;UBERON:0011159,1.46e-07,5;UBERON:0002185,2.26e-07,5;UBERON:0004807,3.03e-07,28;UBERON:0000166,3.17e-07,22;UBERON:0003729,4.19e-07,13;UBERON:0000165,8.40e-07,29;UBERON:0000930,8.40e-07,29 | |||
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|short_description=p@chr5:167246664..167246691,+ | |short_description=p@chr5:167246664..167246691,+ | ||
}} | }} |
Latest revision as of 12:43, 30 July 2015
Short description: | p@chr5:167246664..167246691, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:167246664..167246691, + |
Coexpression cluster: | C592_Sebocyte_Small_Keratinocyte_Gingival_Mallassezderived_oral_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.73e-13 | 74 |
endoderm-derived structure | 5.50e-13 | 160 |
endoderm | 5.50e-13 | 160 |
presumptive endoderm | 5.50e-13 | 160 |
gingival epithelium | 1.56e-12 | 3 |
lower respiratory tract epithelium | 5.02e-12 | 3 |
epithelium of bronchus | 5.02e-12 | 3 |
urothelium | 1.54e-11 | 5 |
respiratory tract | 2.45e-10 | 54 |
surface structure | 3.05e-10 | 99 |
anterior region of body | 7.97e-10 | 62 |
craniocervical region | 7.97e-10 | 62 |
transitional epithelium | 1.25e-09 | 6 |
jaw skeleton | 2.31e-09 | 4 |
splanchnocranium | 2.31e-09 | 4 |
skin gland | 4.09e-09 | 2 |
epidermis gland | 4.09e-09 | 2 |
gland of integumental system | 4.09e-09 | 2 |
sebaceous gland | 4.09e-09 | 2 |
skin sebaceous gland | 4.09e-09 | 2 |
sweat gland | 4.09e-09 | 2 |
sweat gland placode | 4.09e-09 | 2 |
sebaceous gland placode | 4.09e-09 | 2 |
tracheobronchial tree | 1.24e-08 | 15 |
lower respiratory tract | 1.24e-08 | 15 |
head | 2.42e-08 | 56 |
primary subdivision of cranial skeletal system | 1.46e-07 | 5 |
bronchus | 2.26e-07 | 5 |
respiratory system epithelium | 3.03e-07 | 28 |
oral opening | 3.17e-07 | 22 |
mouth mucosa | 4.19e-07 | 13 |
mouth | 8.40e-07 | 29 |
stomodeum | 8.40e-07 | 29 |