FFCP PHASE1:Hg19::chr5:177558079..177558088,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64777 | |EntrezGene=64777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26181 | |HGNC=26181 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_uc003mip.2_5end | |association_with_transcript=-6bp_to_uc003mip.2_5end | ||
|cluster_id=chr5:177558079..177558088,+ | |||
|description=CAGE_peak_4_at_RMND5B_5end | |description=CAGE_peak_4_at_RMND5B_5end | ||
|id=chr5:177558079..177558088,+ | |id=chr5:177558079..177558088,+ | ||
|ontology_enrichment_celltype=CL:0000066!5.32e-07!254 | |ontology_enrichment_celltype=CL:0000066!5.32e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002188;2.68e-09;5!CL:0000540;6.83e-08;6!CL:0000404;6.83e-08;6!CL:1000746;6.98e-07;7!CL:1000612;6.98e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.68e-09,5;CL:0000540,7.58e-08,6;CL:0000031,7.58e-08,6;CL:0000404,7.58e-08,6;CL:1000746,6.98e-07,7;CL:1000612,6.98e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;6.83e-08;6 | |||
|ontology_enrichment_disease=DOID:305!2.49e-11!106;DOID:162!7.61e-09!235;DOID:0050687!1.67e-08!143;DOID:14566!3.93e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:5093;5.10e-25;4!DOID:1612;5.10e-25;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,4.54e-25,4;DOID:1612,4.54e-25,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000310;2.30e-10;10!UBERON:0001443;1.81e-09;11!UBERON:0000074;6.98e-07;7!UBERON:0001229;6.98e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,2.20e-10,10;UBERON:0001443,1.74e-09,11;UBERON:0010532,6.98e-07,7;UBERON:0000074,6.98e-07,7;UBERON:0001229,6.98e-07,7;UBERON:0001230,6.98e-07,7;UBERON:0003220,6.98e-07,7;UBERON:0005749,6.98e-07,7;UBERON:0004199,6.98e-07,7;UBERON:0004209,6.98e-07,7;UBERON:0004198,6.98e-07,7 | |||
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| ||
|short_description=p4@RMND5B | |short_description=p4@RMND5B | ||
}} | }} |
Latest revision as of 07:33, 17 September 2015
Short description: | p4@RMND5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RMND5B_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_uc003mip.2_5end |
EntrezGene: | RMND5B |
HGNC: | 26181 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.68e-09 | 5 |
neuron | 7.58e-08 | 6 |
neuroblast | 7.58e-08 | 6 |
electrically signaling cell | 7.58e-08 | 6 |
glomerular cell | 6.98e-07 | 7 |
kidney corpuscule cell | 6.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
breast | 2.20e-10 | 10 |
chest | 1.74e-09 | 11 |
primitive nephron | 6.98e-07 | 7 |
renal glomerulus | 6.98e-07 | 7 |
renal corpuscle | 6.98e-07 | 7 |
glomerular capsule | 6.98e-07 | 7 |
metanephric mesenchyme | 6.98e-07 | 7 |
glomerular tuft | 6.98e-07 | 7 |
S-shaped body | 6.98e-07 | 7 |
renal vesicle | 6.98e-07 | 7 |
comma-shaped body | 6.98e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 4.54e-25 | 4 |
breast cancer | 4.54e-25 | 4 |