FFCP PHASE1:Hg19::chr5:43658971..43658985,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23530 | |EntrezGene=23530 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=7863 | |HGNC=7863 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5H5 | |UniProt=Q8N5H5 | ||
|association_with_transcript=-394bp_to_BC032370_5end | |association_with_transcript=-394bp_to_BC032370_5end | ||
|cluster_id=chr5:43658971..43658985,+ | |||
|description=CAGE_peak_3_at_NNT_5end | |description=CAGE_peak_3_at_NNT_5end | ||
|id=chr5:43658971..43658985,+ | |id=chr5:43658971..43658985,+ | ||
|ontology_enrichment_celltype=CL:0000136!7.89e-17!15;CL:0002334!9.88e-08!12;CL:0000153!2.29e-07!9;CL:0000447!2.29e-07!9 | |ontology_enrichment_celltype=CL:0000136!7.89e-17!15;CL:0002334!9.88e-08!12;CL:0000153!2.29e-07!9;CL:0000447!2.29e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000136;2.26e-30;13!CL:0000153;1.50e-17;9!CL:0000447;1.50e-17;9!CL:0002617;3.26e-13;2!CL:0000327;1.89e-10;15!CL:0000138;6.78e-10;6!CL:0000214;8.74e-10;3!CL:0000515;2.58e-09;3!CL:0002568;9.12e-08;1!CL:0002601;1.91e-07;1!CL:0000056;3.43e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.89e-40,15;CL:0000153,1.89e-17,9;CL:0000447,1.89e-17,9;CL:0002617,3.94e-13,2;CL:0000327,2.15e-10,15;CL:0000058,8.28e-10,6;CL:0000138,8.28e-10,6;CL:0000214,8.75e-10,3;CL:0002568,7.76e-08,1;CL:0002601,2.47e-07,1;CL:0000515,2.89e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;3.43e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.31e-08!12;UBERON:0000042!1.31e-08!12;UBERON:0003688!1.18e-07!6;UBERON:0002358!1.18e-07!6;UBERON:0003684!1.18e-07!6;UBERON:0001178!1.18e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;7.92e-12;9!UBERON:0000042;7.92e-12;9!UBERON:0006915;8.74e-10;3!UBERON:0007616;8.74e-10;3!UBERON:0002217;8.74e-10;3!UBERON:0002018;8.74e-10;3!UBERON:0000029;1.91e-07;1!UBERON:0002134;1.91e-07;1!UBERON:0005208;1.91e-07;1!UBERON:0004145;1.91e-07;1!UBERON:0005946;1.91e-07;1!UBERON:0005965;1.91e-07;1!UBERON:0002078;1.91e-07;1!UBERON:0001013;3.01e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006915,8.75e-10,3;UBERON:0007616,8.75e-10,3;UBERON:0002217,8.75e-10,3;UBERON:0002018,8.75e-10,3;UBERON:0004457,7.15e-09,12;UBERON:0000042,7.15e-09,12;UBERON:0000029,1.39e-07,1;UBERON:0002134,1.69e-07,1;UBERON:0005208,1.69e-07,1;UBERON:0005946,1.69e-07,1;UBERON:0005965,1.69e-07,1;UBERON:0002078,1.69e-07,1;UBERON:0001013,3.20e-07,14 | |||
|phase1_expression=1.09007027562334,1.2846031433459,0.563817616383885,2.00146596706261,0.893922188854576,0,0,0,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,2.02785126545153,0,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.635795703478686,0,0.515262646192195,0.257640540045629,2.23340227597908,0,0.389748020644795,0,1.10459878370759,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71470603091333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,1.73737568001095,0.205476322550383,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.561320188866147,0,3.07024349440022,0.160853921143607,0,0.462629081407967,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0.545999645631943,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,4.71595396862982,0,1.06428319221179,10.3442741295855,7.90307743103764,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,1.22313785466253,1.35983700206033,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,6.52821364043369,15.5427734294074,23.5886094107865,15.7378862740706,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.601030435988874,0.380805212168795,0,0,0,0,0,0,1.03018711554838,1.01024846629776,0,0,24.4463414167415,0,0,0,0,0.358177682162975,0,1.75427239662966,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.470958557103084,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47088993052343,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0.134704106029175,0.286888821570705,0,0,0.320182037633146,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | |phase1_expression=1.09007027562334,1.2846031433459,0.563817616383885,2.00146596706261,0.893922188854576,0,0,0,1.82829939739887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,1.00267582127178,2.02785126545153,0,1.45990461090791,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0.427114777637135,0.635795703478686,0,0.515262646192195,0.257640540045629,2.23340227597908,0,0.389748020644795,0,1.10459878370759,0.323292113637624,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71470603091333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,1.73737568001095,0.205476322550383,2.14873155887875,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.347534457872331,0,0,0,0,0,0,0,0,0.496215615637554,0.460385919864187,0.561320188866147,0,3.07024349440022,0.160853921143607,0,0.462629081407967,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0,0.917870904715969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.290012154876366,0,0.15350367472613,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0.532306030317022,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0.487426979262569,1.05650146756755,0.545999645631943,0.282810863907425,0,0,0,0,0,0,0,0.6196469961995,0,0.143411352204052,4.71595396862982,0,1.06428319221179,10.3442741295855,7.90307743103764,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4906390476222,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.341826167541004,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,1.22313785466253,1.35983700206033,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,1.43574604915363,0,0,0.446342914883745,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48849806543585,0,0,0,6.52821364043369,15.5427734294074,23.5886094107865,15.7378862740706,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0.601030435988874,0.380805212168795,0,0,0,0,0,0,1.03018711554838,1.01024846629776,0,0,24.4463414167415,0,0,0,0,0.358177682162975,0,1.75427239662966,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0.222462803784138,0.470958557103084,0,0,0,0,0.47775168788705,0.0714765441766563,0,0,0,0,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47088993052343,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0.743990036333503,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0,0.258355639344024,0.124149428591716,0,0,0,0,0,0.134704106029175,0.286888821570705,0,0,0.320182037633146,0,0,0,0.244482888365733,0,0,0.201273793591026,0 | ||
|short_description=p3@NNT | |short_description=p3@NNT | ||
}} | }} |
Latest revision as of 00:52, 18 September 2015
Short description: | p3@NNT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NNT_5end |
Coexpression cluster: | NA |
Association with transcript: | -394bp_to_BC032370_5end |
EntrezGene: | NNT |
HGNC: | 7863 |
UniProt: | Q8N5H5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.89e-40 | 15 |
GAG secreting cell | 1.89e-17 | 9 |
carbohydrate secreting cell | 1.89e-17 | 9 |
adipocyte of breast | 3.94e-13 | 2 |
extracellular matrix secreting cell | 2.15e-10 | 15 |
chondroblast | 8.28e-10 | 6 |
chondrocyte | 8.28e-10 | 6 |
synovial cell | 8.75e-10 | 3 |
mesenchymal stem cell of Wharton's jelly | 7.76e-08 | 1 |
uterine smooth muscle cell | 2.47e-07 | 1 |
skeletal muscle myoblast | 2.89e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
stratified squamous epithelium | 8.75e-10 | 3 |
layer of synovial tissue | 8.75e-10 | 3 |
synovial joint | 8.75e-10 | 3 |
synovial membrane of synovial joint | 8.75e-10 | 3 |
cavity lining | 7.15e-09 | 12 |
serous membrane | 7.15e-09 | 12 |
lymph node | 1.39e-07 | 1 |
tricuspid valve | 1.69e-07 | 1 |
right atrium valve | 1.69e-07 | 1 |
outflow tract of atrium | 1.69e-07 | 1 |
outflow part of right atrium | 1.69e-07 | 1 |
right cardiac atrium | 1.69e-07 | 1 |
adipose tissue | 3.20e-07 | 14 |