FFCP PHASE1:Hg19::chr1:68150608..68150622,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:68150608..68150622,- | |||
|description=CAGE_peak_at_chr1:68150608..68150622,- | |description=CAGE_peak_at_chr1:68150608..68150622,- | ||
|id=chr1:68150608..68150622,- | |id=chr1:68150608..68150622,- | ||
|ontology_enrichment_celltype=CL:0002159!7.88e-07!13 | |ontology_enrichment_celltype=CL:0002159!7.88e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0000317;7.40e-22;2!CL:1000448;7.40e-22;2!CL:0002308;7.40e-22;2!CL:0002140;7.40e-22;2!CL:0002328;6.53e-15;3!CL:0002621;6.53e-15;3!CL:0002368;4.08e-13;13!CL:0000244;2.02e-11;4!CL:0000731;2.02e-11;4!CL:0002202;4.76e-11;9!CL:0002632;4.76e-11;9!CL:0000622;2.57e-09;5!CL:0000154;6.59e-08;6!CL:0002076;1.74e-07;42!CL:0002159;2.77e-07;14!CL:0001014;9.69e-07;2!CL:0001016;9.69e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.02e-21,2;CL:1000448,1.02e-21,2;CL:0002308,1.02e-21,2;CL:0002140,1.02e-21,2;CL:0002328,1.07e-14,3;CL:0002621,1.51e-14,3;CL:0002368,4.36e-13,13;CL:0000244,1.19e-11,4;CL:0000731,1.19e-11,4;CL:0002202,5.77e-11,9;CL:0002632,5.77e-11,9;CL:0000622,2.91e-09,5;CL:0002076,1.73e-08,42;CL:0000154,7.33e-08,6;CL:0002159,2.57e-07,14;CL:0001014,9.44e-07,2;CL:0001016,9.44e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005910!1.26e-07!6 | |ontology_enrichment_uberon=UBERON:0005910!1.26e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0002419;7.40e-22;2!UBERON:0007771;7.40e-22;2!UBERON:0003297;7.40e-22;2!UBERON:0001821;7.40e-22;2!UBERON:0003487;7.40e-22;2!UBERON:0001820;7.40e-22;2!UBERON:0004815;6.53e-15;3!UBERON:0002031;6.53e-15;3!UBERON:0001949;6.53e-15;3!UBERON:0000486;3.46e-14;12!UBERON:0000365;2.57e-09;5!UBERON:0002185;2.57e-09;5!UBERON:0005911;5.71e-09;36!UBERON:0005910;6.59e-08;6!UBERON:0004807;7.84e-08;22!UBERON:0000485;6.77e-07;7!UBERON:0003929;6.77e-07;7!UBERON:0007196;7.88e-07;15!UBERON:0001558;7.88e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.02e-21,2;UBERON:0007771,1.02e-21,2;UBERON:0003297,1.02e-21,2;UBERON:0001821,1.02e-21,2;UBERON:0003487,1.02e-21,2;UBERON:0001820,1.02e-21,2;UBERON:0005089,1.02e-21,2;UBERON:0005088,1.02e-21,2;UBERON:0004815,1.07e-14,3;UBERON:0002031,1.07e-14,3;UBERON:0001949,1.51e-14,3;UBERON:0000365,1.69e-09,5;UBERON:0002185,3.44e-09,5;UBERON:0005910,4.66e-08,6;UBERON:0007196,8.81e-07,15;UBERON:0001558,8.81e-07,15 | |||
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| ||
|short_description=p@chr1:68150608..68150622,- | |short_description=p@chr1:68150608..68150622,- | ||
}} | }} |
Latest revision as of 10:04, 28 July 2015
Short description: | p@chr1:68150608..68150622, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:68150608..68150622, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.02e-21 | 2 |
epithelial cell of sweat gland | 1.02e-21 | 2 |
epithelial cell of skin gland | 1.02e-21 | 2 |
acinar cell of sebaceous gland | 1.02e-21 | 2 |
bronchial epithelial cell | 1.07e-14 | 3 |
gingival epithelial cell | 1.51e-14 | 3 |
respiratory epithelial cell | 4.36e-13 | 13 |
transitional epithelial cell | 1.19e-11 | 4 |
urothelial cell | 1.19e-11 | 4 |
epithelial cell of tracheobronchial tree | 5.77e-11 | 9 |
epithelial cell of lower respiratory tract | 5.77e-11 | 9 |
acinar cell | 2.91e-09 | 5 |
endo-epithelial cell | 1.73e-08 | 42 |
protein secreting cell | 7.33e-08 | 6 |
general ecto-epithelial cell | 2.57e-07 | 14 |
CD1a-positive Langerhans cell | 9.44e-07 | 2 |
immature CD1a-positive Langerhans cell | 9.44e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.02e-21 | 2 |
epidermis gland | 1.02e-21 | 2 |
gland of integumental system | 1.02e-21 | 2 |
sebaceous gland | 1.02e-21 | 2 |
skin sebaceous gland | 1.02e-21 | 2 |
sweat gland | 1.02e-21 | 2 |
sweat gland placode | 1.02e-21 | 2 |
sebaceous gland placode | 1.02e-21 | 2 |
lower respiratory tract epithelium | 1.07e-14 | 3 |
epithelium of bronchus | 1.07e-14 | 3 |
gingival epithelium | 1.51e-14 | 3 |
urothelium | 1.69e-09 | 5 |
bronchus | 3.44e-09 | 5 |
transitional epithelium | 4.66e-08 | 6 |
tracheobronchial tree | 8.81e-07 | 15 |
lower respiratory tract | 8.81e-07 | 15 |