FFCP PHASE1:Hg19::chr13:100624012..100624026,-: Difference between revisions
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|id=chr13:100624012..100624026,-
|short_description=p3@ZIC5
|description=CAGE_peak_3_at_ZIC5_5end
|association_with_transcript=136bp_to_ENST00000267294_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=85416 | |EntrezGene=85416 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20322 | |HGNC=20322 | ||
|TSSclassifier=strong | |||
|UniProt=Q96T25 | |UniProt=Q96T25 | ||
|association_with_transcript=136bp_to_ENST00000267294_5end | |||
|cluster_id=chr13:100624012..100624026,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_3_at_ZIC5_5end | |||
|id=chr13:100624012..100624026,- | |||
|ontology_enrichment_celltype=CL:0002322!7.15e-16!5;CL:0000133!4.14e-15!59;CL:0000128!6.53e-15!7;CL:0000126!6.53e-15!7;CL:0000127!6.53e-15!7;CL:0002453!6.53e-15!7;CL:0002319!1.60e-13!25;CL:0000221!8.84e-12!71;CL:0000064!3.80e-10!3;CL:0005012!3.80e-10!3;CL:0000067!3.80e-10!3;CL:0002304!3.80e-10!3;CL:0002603!6.76e-10!3;CL:0002605!2.50e-09!3;CL:0000333!5.26e-09!41;CL:0000095!1.34e-08!17;CL:0000123!1.34e-08!17;CL:0000243!1.36e-07!15;CL:0000125!1.36e-07!15;CL:0000030!1.36e-07!15;CL:0000339!1.36e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000333;1.24e-18;5!CL:0002321;7.34e-14;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.01e-67;3 | |||
|ontology_enrichment_disease=DOID:171!6.17e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.78e-35;10!DOID:3095;2.44e-16;22!DOID:2994;2.44e-16;22!DOID:169;1.05e-15;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.55e-35,10;DOID:3095,2.34e-16,22;DOID:2994,2.34e-16,22;DOID:169,1.05e-15,6 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;5.37e-34;6!UBERON:0002680;5.99e-23;9!UBERON:0001895;5.99e-23;9!UBERON:0002346;1.12e-22;4!UBERON:0000923;1.12e-22;4!UBERON:0010316;1.12e-22;4!UBERON:0005291;1.12e-22;4!UBERON:0000013;1.24e-18;5!UBERON:0002410;1.24e-18;5!UBERON:0002050;2.30e-18;5!UBERON:0005423;2.30e-18;5!UBERON:0004733;2.09e-17;12!UBERON:0002028;2.09e-17;12!UBERON:0004732;3.99e-16;13!UBERON:0000010;8.37e-11;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,5.37e-34,6;UBERON:0006215,5.37e-34,6;UBERON:0002680,5.99e-23,9;UBERON:0001895,5.99e-23,9;UBERON:0010092,5.99e-23,9;UBERON:0000013,1.24e-18,5;UBERON:0002410,1.24e-18,5;UBERON:0004733,2.09e-17,12;UBERON:0002028,2.09e-17,12;UBERON:0007277,2.09e-17,12;UBERON:0004732,3.99e-16,13;UBERON:0003076,4.52e-14,15;UBERON:0003057,4.52e-14,15;UBERON:0000010,8.37e-11,8 | |||
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| ||
|short_description=p3@ZIC5 | |||
}} | }} |
Latest revision as of 07:42, 16 September 2015
Short description: | p3@ZIC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZIC5_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 136bp_to_ENST00000267294_5end |
EntrezGene: | ZIC5 |
HGNC: | 20322 |
UniProt: | Q96T25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 5.37e-34 | 6 |
rhombic lip | 5.37e-34 | 6 |
regional part of metencephalon | 5.99e-23 | 9 |
metencephalon | 5.99e-23 | 9 |
future metencephalon | 5.99e-23 | 9 |
sympathetic nervous system | 1.24e-18 | 5 |
autonomic nervous system | 1.24e-18 | 5 |
segmental subdivision of hindbrain | 2.09e-17 | 12 |
hindbrain | 2.09e-17 | 12 |
presumptive hindbrain | 2.09e-17 | 12 |
segmental subdivision of nervous system | 3.99e-16 | 13 |
posterior neural tube | 4.52e-14 | 15 |
chordal neural plate | 4.52e-14 | 15 |
peripheral nervous system | 8.37e-11 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.55e-35 | 10 |
germ cell and embryonal cancer | 2.34e-16 | 22 |
germ cell cancer | 2.34e-16 | 22 |
neuroendocrine tumor | 1.05e-15 | 6 |