FFCP PHASE1:Hg19::chr13:112721131..112721138,+: Difference between revisions
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|id=chr13:112721131..112721138,+
|short_description=p@chr13:112721131..112721138,+
|description=CAGE_peak_at_chr13:112721131..112721138,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:112721131..112721138,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_at_chr13:112721131..112721138,+ | |||
|id=chr13:112721131..112721138,+ | |||
|ontology_enrichment_celltype=CL:0002605!4.45e-13!3;CL:0002319!9.60e-11!25;CL:0000128!2.23e-09!7;CL:0000126!2.23e-09!7;CL:0000127!2.23e-09!7;CL:0002453!2.23e-09!7;CL:0000047!9.19e-09!8 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.53e-44;2!CL:0000540;9.74e-16;6!CL:0000404;9.74e-16;6!CL:0002319;1.81e-13;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.97e-44,8;CL:0000540,1.05e-15,6;CL:0000031,1.05e-15,6;CL:0000404,1.05e-15,6;CL:0002319,1.87e-13,25 | |||
|ontology_enrichment_development_v019=CL:0000031;9.74e-16;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!3.18e-54!34;UBERON:0002791!5.83e-51!33;UBERON:0001049!9.81e-50!57;UBERON:0005068!9.81e-50!57;UBERON:0006241!9.81e-50!57;UBERON:0007135!9.81e-50!57;UBERON:0001017!1.15e-49!82;UBERON:0002020!1.41e-49!34;UBERON:0003528!1.41e-49!34;UBERON:0001869!4.12e-48!32;UBERON:0005743!5.00e-47!86;UBERON:0002616!2.09e-44!59;UBERON:0002780!3.32e-44!41;UBERON:0001890!3.32e-44!41;UBERON:0006240!3.32e-44!41;UBERON:0003080!4.85e-43!42;UBERON:0000073!6.95e-42!94;UBERON:0001016!6.95e-42!94;UBERON:0002346!8.49e-42!90;UBERON:0000955!1.60e-39!69;UBERON:0006238!1.60e-39!69;UBERON:0003075!1.10e-35!86;UBERON:0007284!1.10e-35!86;UBERON:0000956!1.75e-35!25;UBERON:0000203!1.75e-35!25;UBERON:0003056!9.14e-31!61;UBERON:0000924!7.45e-29!173;UBERON:0006601!7.45e-29!173;UBERON:0002619!3.33e-26!22;UBERON:0004121!1.43e-24!169;UBERON:0000033!1.51e-24!123;UBERON:0001950!1.60e-24!20;UBERON:0000153!4.54e-23!129;UBERON:0007811!4.54e-23!129;UBERON:0007023!2.66e-16!115;UBERON:0002308!2.39e-15!9;UBERON:0000125!2.39e-15!9;UBERON:0002420!2.52e-15!9;UBERON:0007245!2.52e-15!9;UBERON:0010009!2.52e-15!9;UBERON:0010011!2.52e-15!9;UBERON:0000454!2.52e-15!9;UBERON:0009663!6.64e-14!7;UBERON:0001871!1.88e-12!7;UBERON:0000200!1.63e-10!6;UBERON:0000025!6.97e-10!194;UBERON:0000369!1.17e-09!4;UBERON:0002435!1.17e-09!4;UBERON:0000204!1.17e-09!4;UBERON:0010082!1.17e-09!4;UBERON:0003076!1.78e-08!15;UBERON:0003057!1.78e-08!15;UBERON:0000349!8.96e-08!5;UBERON:0002298!1.08e-07!8;UBERON:0004733!1.19e-07!12;UBERON:0002028!1.19e-07!12;UBERON:0007277!1.19e-07!12;UBERON:0001872!1.52e-07!5;UBERON:0004111!1.92e-07!241;UBERON:0000064!2.79e-07!219;UBERON:0004732!4.86e-07!13;UBERON:0002680!6.41e-07!9;UBERON:0001895!6.41e-07!9;UBERON:0010092!6.41e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.92e-10;49!UBERON:0001950;3.80e-10;20!UBERON:0002619;2.55e-09;22!UBERON:0000956;2.59e-08;25!UBERON:0000203;2.59e-08;25!UBERON:0001016;5.87e-08;83!UBERON:0002346;7.69e-07;4!UBERON:0000923;7.69e-07;4!UBERON:0010316;7.69e-07;4!UBERON:0005291;7.69e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.29e-17,81;UBERON:0001016,4.18e-15,89;UBERON:0001950,4.04e-10,20;UBERON:0004121,5.05e-10,171;UBERON:0000924,5.05e-10,171;UBERON:0006601,5.05e-10,171;UBERON:0002619,2.70e-09,22;UBERON:0000956,2.72e-08,25;UBERON:0000203,2.72e-08,25 | |||
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| ||
|short_description=p@chr13:112721131..112721138,+ | |||
}} | }} |
Latest revision as of 14:40, 24 July 2015
Short description: | p@chr13:112721131..112721138, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:112721131..112721138, + |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.97e-44 | 8 |
neuron | 1.05e-15 | 6 |
neuroblast | 1.05e-15 | 6 |
electrically signaling cell | 1.05e-15 | 6 |
neural cell | 1.87e-13 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.29e-17 | 81 |
nervous system | 4.18e-15 | 89 |
neocortex | 4.04e-10 | 20 |
ectoderm-derived structure | 5.05e-10 | 171 |
ectoderm | 5.05e-10 | 171 |
presumptive ectoderm | 5.05e-10 | 171 |
regional part of cerebral cortex | 2.70e-09 | 22 |
cerebral cortex | 2.72e-08 | 25 |
pallium | 2.72e-08 | 25 |