FFCP PHASE1:Hg19::chr20:39043715..39043719,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:39043715..39043719,+ | |||
|description=CAGE_peak_at_chr20:39043715..39043719,+ | |description=CAGE_peak_at_chr20:39043715..39043719,+ | ||
|id=chr20:39043715..39043719,+ | |id=chr20:39043715..39043719,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.66e-17!43;CL:0000223!1.16e-13!59;CL:0002251!5.70e-11!21;CL:0002368!1.25e-07!13;CL:0000066!3.17e-07!254 | |ontology_enrichment_celltype=CL:0002076!1.66e-17!43;CL:0000223!1.16e-13!59;CL:0002251!5.70e-11!21;CL:0002368!1.25e-07!13;CL:0000066!3.17e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002328;1.96e-14;3!CL:0002368;3.43e-13;13!CL:0002327;2.53e-11;4!CL:0002543;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002328,1.83e-14,3;CL:0002368,3.22e-13,13;CL:0002327,2.53e-11,4;CL:0002543,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0008425;6.62e-41;1 | |||
|ontology_enrichment_disease=DOID:1749!4.00e-10!14;DOID:305!4.41e-07!106 | |ontology_enrichment_disease=DOID:1749!4.00e-10!14;DOID:305!4.41e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.53e-11;4!DOID:1612;2.53e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.53e-11,4;DOID:1612,2.53e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0003729!3.35e-13!5;UBERON:0000974!5.83e-10!10;UBERON:0003343!7.32e-10!4;UBERON:0004785!7.32e-10!4;UBERON:0000341!6.17e-09!2;UBERON:0000344!2.75e-08!12;UBERON:0004119!5.10e-07!169;UBERON:0000925!5.10e-07!169;UBERON:0006595!5.10e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.96e-14;3!UBERON:0002031;1.96e-14;3!UBERON:0001911;2.53e-11;4!UBERON:0002185;3.35e-09;5!UBERON:0000485;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.83e-14,3;UBERON:0002031,1.83e-14,3;UBERON:0001911,2.53e-11,4;UBERON:0005333,2.53e-11,4;UBERON:0008425,2.53e-11,4;UBERON:0005311,2.53e-11,4;UBERON:0002185,3.22e-09,5 | |||
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| ||
|short_description=p@chr20:39043715..39043719,+ | |short_description=p@chr20:39043715..39043719,+ | ||
}} | }} |
Latest revision as of 13:59, 28 July 2015
Short description: | p@chr20:39043715..39043719, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:39043715..39043719, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bronchial epithelial cell | 1.83e-14 | 3 |
respiratory epithelial cell | 3.22e-13 | 13 |
mammary gland epithelial cell | 2.53e-11 | 4 |
vein endothelial cell | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.83e-14 | 3 |
epithelium of bronchus | 1.83e-14 | 3 |
mammary gland | 2.53e-11 | 4 |
mammary bud | 2.53e-11 | 4 |
mammary ridge | 2.53e-11 | 4 |
mammary placode | 2.53e-11 | 4 |
bronchus | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.53e-11 | 4 |
breast cancer | 2.53e-11 | 4 |