FFCP PHASE1:Hg19::chr13:28527647..28527667,+: Difference between revisions
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|id=chr13:28527647..28527667,+
|short_description=p1@AK000246
|description=CAGE_peak_1_at_AK000246_5end
|association_with_transcript=0bp_to_AK000246_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_AK000246_5end | |||
|cluster_id=chr13:28527647..28527667,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_AK000246_5end | |||
|id=chr13:28527647..28527667,+ | |||
|ontology_enrichment_celltype=CL:0002178!1.03e-09!3;CL:0002563!1.39e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002231;7.76e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;7.72e-21;1 | |||
|ontology_enrichment_disease=DOID:3493!4.94e-14!2;DOID:299!4.75e-09!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.85e-29!35;UBERON:0000160!1.14e-27!27;UBERON:0001155!8.98e-19!9;UBERON:0000059!2.48e-15!11;UBERON:0004921!5.38e-15!129;UBERON:0004185!5.38e-15!129;UBERON:0001007!2.14e-13!155;UBERON:0001555!2.14e-13!155;UBERON:0007026!2.14e-13!155;UBERON:0004119!5.77e-12!169;UBERON:0000925!5.77e-12!169;UBERON:0006595!5.77e-12!169;UBERON:0002108!1.82e-11!14;UBERON:0001154!5.05e-08!1;UBERON:0001153!5.05e-08!1;UBERON:0001301!6.63e-08!1;UBERON:0001242!1.39e-07!4;UBERON:0001262!1.39e-07!4;UBERON:0004786!1.39e-07!4;UBERON:0004808!1.39e-07!4;UBERON:0001277!1.39e-07!4;UBERON:0000481!2.28e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;1.78e-36;4!UBERON:0000160;7.42e-28;17!UBERON:0005409;7.32e-22;22!UBERON:0004921;8.84e-13;33!UBERON:0001155;6.78e-10;9!UBERON:0000059;2.92e-08;11!UBERON:0002114;4.52e-08;2!UBERON:0002110;7.76e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,1.78e-36,4;UBERON:0000160,7.02e-28,17;UBERON:0005409,2.20e-19,25;UBERON:0001155,6.48e-10,9;UBERON:0001007,2.42e-08,145;UBERON:0001555,2.42e-08,145;UBERON:0007026,2.42e-08,145;UBERON:0000059,2.82e-08,11;UBERON:0002114,4.52e-08,2;UBERON:0004921,5.88e-08,118;UBERON:0002110,8.29e-08,3;UBERON:0006242,8.29e-08,3;UBERON:0004119,1.60e-07,160;UBERON:0000925,1.60e-07,160;UBERON:0006595,1.60e-07,160 | |||
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|short_description=p1@AK000246 | |||
}} | }} |
Latest revision as of 15:21, 24 July 2015
Short description: | p1@AK000246 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AK000246_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_AK000246_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
small intestine | 1.78e-36 | 4 |
intestine | 7.02e-28 | 17 |
gastrointestinal system | 2.20e-19 | 25 |
colon | 6.48e-10 | 9 |
digestive system | 2.42e-08 | 145 |
digestive tract | 2.42e-08 | 145 |
primitive gut | 2.42e-08 | 145 |
large intestine | 2.82e-08 | 11 |
duodenum | 4.52e-08 | 2 |
subdivision of digestive tract | 5.88e-08 | 118 |
gallbladder | 8.29e-08 | 3 |
gall bladder primordium | 8.29e-08 | 3 |
endoderm-derived structure | 1.60e-07 | 160 |
endoderm | 1.60e-07 | 160 |
presumptive endoderm | 1.60e-07 | 160 |