FFCP PHASE1:Hg19::chr20:60330113..60330129,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-1bp_to_ENST00000447909_5end | |association_with_transcript=-1bp_to_ENST00000447909_5end | ||
|cluster_id=chr20:60330113..60330129,- | |||
|coexpression_cluster_id=C206 | |||
|description=CAGE_peak_1_at_ENST00000447909_5end | |description=CAGE_peak_1_at_ENST00000447909_5end | ||
|id=chr20:60330113..60330129,- | |id=chr20:60330113..60330129,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002566;1.56e-19;1!CL:0000817;3.56e-19;1!CL:0000148;6.02e-17;10!CL:0000147;2.68e-12;14!CL:0000710;8.64e-09;20!CL:0002567;2.88e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.56e-19,1;CL:0000148,5.55e-17,10;CL:0000541,5.55e-17,10;CL:0000147,2.53e-12,14;CL:0000710,8.30e-09,20;CL:0002567,2.63e-07,3;CL:0000817,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.23e-12!14;DOID:1909!1.00e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.30e-37;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.30e-37,2 | |||
|ontology_enrichment_uberon=UBERON:0001950!2.83e-21!20;UBERON:0002619!3.85e-19!22;UBERON:0000200!7.37e-17!6;UBERON:0001869!1.11e-16!32;UBERON:0000956!1.47e-16!25;UBERON:0000203!1.47e-16!25;UBERON:0007023!6.60e-16!115;UBERON:0001893!1.65e-15!34;UBERON:0002791!5.31e-14!33;UBERON:0003080!7.56e-14!42;UBERON:0002020!1.67e-13!34;UBERON:0003528!1.67e-13!34;UBERON:0001871!4.39e-13!7;UBERON:0002780!2.66e-12!41;UBERON:0001890!2.66e-12!41;UBERON:0006240!2.66e-12!41;UBERON:0003056!1.05e-09!61;UBERON:0005743!2.13e-09!86;UBERON:0002771!2.16e-09!3;UBERON:0001049!2.98e-09!57;UBERON:0005068!2.98e-09!57;UBERON:0006241!2.98e-09!57;UBERON:0007135!2.98e-09!57;UBERON:0000955!5.47e-09!69;UBERON:0006238!5.47e-09!69;UBERON:0001017!6.26e-09!82;UBERON:0002616!8.11e-09!59;UBERON:0000073!4.61e-08!94;UBERON:0001016!4.61e-08!94;UBERON:0003075!1.48e-07!86;UBERON:0007284!1.48e-07!86;UBERON:0001870!2.70e-07!2;UBERON:0002346!4.93e-07!90 | |ontology_enrichment_uberon=UBERON:0001950!2.83e-21!20;UBERON:0002619!3.85e-19!22;UBERON:0000200!7.37e-17!6;UBERON:0001869!1.11e-16!32;UBERON:0000956!1.47e-16!25;UBERON:0000203!1.47e-16!25;UBERON:0007023!6.60e-16!115;UBERON:0001893!1.65e-15!34;UBERON:0002791!5.31e-14!33;UBERON:0003080!7.56e-14!42;UBERON:0002020!1.67e-13!34;UBERON:0003528!1.67e-13!34;UBERON:0001871!4.39e-13!7;UBERON:0002780!2.66e-12!41;UBERON:0001890!2.66e-12!41;UBERON:0006240!2.66e-12!41;UBERON:0003056!1.05e-09!61;UBERON:0005743!2.13e-09!86;UBERON:0002771!2.16e-09!3;UBERON:0001049!2.98e-09!57;UBERON:0005068!2.98e-09!57;UBERON:0006241!2.98e-09!57;UBERON:0007135!2.98e-09!57;UBERON:0000955!5.47e-09!69;UBERON:0006238!5.47e-09!69;UBERON:0001017!6.26e-09!82;UBERON:0002616!8.11e-09!59;UBERON:0000073!4.61e-08!94;UBERON:0001016!4.61e-08!94;UBERON:0003075!1.48e-07!86;UBERON:0007284!1.48e-07!86;UBERON:0001870!2.70e-07!2;UBERON:0002346!4.93e-07!90 | ||
|ontology_enrichment_uberon_v019=UBERON:0002022;3.56e-19;1!UBERON:0001871;3.48e-11;6!UBERON:0002771;2.85e-10;2!UBERON:0001950;2.74e-08;20!UBERON:0002619;1.29e-07;22!UBERON:0000956;8.45e-07;25!UBERON:0000203;8.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,3.91e-19,1;UBERON:0001871,3.30e-11,6;UBERON:0002771,2.27e-10,2;UBERON:0001950,2.71e-08,20;UBERON:0002619,1.27e-07,22;UBERON:0000956,8.37e-07,25;UBERON:0000203,8.37e-07,25 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,4.19086102328316,1.52795370223311,0,0,5.14137463516618,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39723980313457,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.58634144372552,0.250381861413,0,0,0,0,0,10.9187364629986,28.2610680209518,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.318593534327405,0.899606224327209,0,0,0,0.521745061811734,0.450772826991655,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.779441235357554,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0,0.615349092722265,0,0.345786262321089,0.645902582527404,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0.207328115540772,0,0,4.19086102328316,1.52795370223311,0,0,5.14137463516618,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71295439353627,0.871533458600294,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00988449083511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.371072392647405,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.633107959558787,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39723980313457,0,0,0,0,0,0,0,0,0,0,0.864221491201268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,1.58634144372552,0.250381861413,0,0,0,0,0,10.9187364629986,28.2610680209518,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0.318593534327405,0.899606224327209,0,0,0,0.521745061811734,0.450772826991655,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0.779441235357554,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0,0.615349092722265,0,0.345786262321089,0.645902582527404,0,0,0,0,0,0,0,0,0,0.60511520611056,0,0,0,0,0.135075169236789,0,0,0.253663240775627,0,0,0.496211178389294,0,0.127762427639595,0,0,0,0,0.0887023701626388,0,0,0,0.197318320688547,0,0,0,0,0,0,0,0,0.78624198594322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15585533324555,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p1@ENST00000447909 | |short_description=p1@ENST00000447909 | ||
}} | }} |
Latest revision as of 16:03, 28 July 2015
Short description: | p1@ENST00000447909 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000447909_5end |
Coexpression cluster: | C206_melanoma_somatostatinoma_nonsmall_small_neuroblastoma_smallcell_pituitary |
Association with transcript: | -1bp_to_ENST00000447909_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.56e-19 | 1 |
melanocyte | 5.55e-17 | 10 |
melanoblast | 5.55e-17 | 10 |
pigment cell | 2.53e-12 | 14 |
neurecto-epithelial cell | 8.30e-09 | 20 |
light melanocyte | 2.63e-07 | 3 |
precursor B cell | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
insula | 3.91e-19 | 1 |
temporal lobe | 3.30e-11 | 6 |
middle temporal gyrus | 2.27e-10 | 2 |
neocortex | 2.71e-08 | 20 |
regional part of cerebral cortex | 1.27e-07 | 22 |
cerebral cortex | 8.37e-07 | 25 |
pallium | 8.37e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.30e-37 | 2 |