FFCP PHASE1:Hg19::chr7:115850628..115850647,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26136 | |EntrezGene=26136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14620 | |HGNC=14620 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000496871_5end | |association_with_transcript=13bp_to_ENST00000496871_5end | ||
|cluster_id=chr7:115850628..115850647,+ | |||
|coexpression_cluster_id=C1983 | |||
|description=CAGE_peak_2_at_TES_5end | |description=CAGE_peak_2_at_TES_5end | ||
|id=chr7:115850628..115850647,+ | |id=chr7:115850628..115850647,+ | ||
|ontology_enrichment_celltype=CL:0000860!2.90e-24!45;CL:0002057!3.24e-24!42;CL:0000738!1.82e-16!140;CL:0002087!8.21e-16!119;CL:0002009!1.15e-14!65;CL:0002194!1.05e-13!63;CL:0000576!1.05e-13!63;CL:0000040!1.05e-13!63;CL:0000559!1.05e-13!63;CL:0002031!2.83e-12!124;CL:0000557!4.45e-12!71;CL:0000766!4.97e-12!76;CL:0000839!9.87e-10!70;CL:0000037!1.17e-08!172;CL:0000566!1.17e-08!172;CL:0000063!1.61e-08!578;CL:0000988!1.89e-08!182;CL:0002032!6.25e-08!165;CL:0000837!6.25e-08!165 | |ontology_enrichment_celltype=CL:0000860!2.90e-24!45;CL:0002057!3.24e-24!42;CL:0000738!1.82e-16!140;CL:0002087!8.21e-16!119;CL:0002009!1.15e-14!65;CL:0002194!1.05e-13!63;CL:0000576!1.05e-13!63;CL:0000040!1.05e-13!63;CL:0000559!1.05e-13!63;CL:0002031!2.83e-12!124;CL:0000557!4.45e-12!71;CL:0000766!4.97e-12!76;CL:0000839!9.87e-10!70;CL:0000037!1.17e-08!172;CL:0000566!1.17e-08!172;CL:0000063!1.61e-08!578;CL:0000988!1.89e-08!182;CL:0002032!6.25e-08!165;CL:0000837!6.25e-08!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.36e-19;33!CL:0002057;2.36e-19;33!CL:0000473;3.63e-14;39!CL:0000234;3.63e-14;39!CL:0000576;2.75e-12;48!CL:0000766;5.65e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.65e-24,42;CL:0002057,1.65e-24,42;CL:0000473,2.77e-21,48;CL:0000234,2.77e-21,48;CL:0000738,2.24e-16,136;CL:0002087,5.30e-16,115;CL:0002009,1.46e-14,61;CL:0002194,1.41e-13,59;CL:0000576,1.41e-13,59;CL:0000040,1.41e-13,59;CL:0000559,1.41e-13,59;CL:0002031,5.01e-12,120;CL:0000557,1.66e-11,67;CL:0000766,1.86e-11,72;CL:0000839,4.12e-09,66;CL:0000037,9.46e-09,168;CL:0000988,1.86e-08,177;CL:0002032,5.85e-08,161;CL:0000837,5.85e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.90e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.61e-13!102;UBERON:0003061!5.61e-13!102;UBERON:0002193!1.01e-11!112;UBERON:0002371!6.23e-10!80;UBERON:0003081!6.84e-10!216;UBERON:0000926!2.41e-09!448;UBERON:0004120!2.41e-09!448;UBERON:0006603!2.41e-09!448;UBERON:0001474!2.21e-07!86;UBERON:0004765!8.20e-07!101;UBERON:0001434!8.20e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.49e-12,98;UBERON:0003061,2.49e-12,98;UBERON:0002193,7.22e-11,108;UBERON:0002371,2.77e-09,76;UBERON:0003081,3.14e-09,203;UBERON:0002405,1.10e-08,93;UBERON:0004765,1.15e-07,90;UBERON:0000926,2.75e-07,315;UBERON:0004120,2.75e-07,315;UBERON:0006603,2.75e-07,315;UBERON:0001474,8.38e-07,82 | |||
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| ||
|short_description=p2@TES | |short_description=p2@TES | ||
}} | }} |
Latest revision as of 06:47, 25 September 2015
Short description: | p2@TES |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TES_5end |
Coexpression cluster: | C1983_gastric_CD14_squamous_amniotic_myeloma_Placental_Wilms |
Association with transcript: | 13bp_to_ENST00000496871_5end |
EntrezGene: | TES |
HGNC: | 14620 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.65e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.65e-24 | 42 |
defensive cell | 2.77e-21 | 48 |
phagocyte | 2.77e-21 | 48 |
leukocyte | 2.24e-16 | 136 |
nongranular leukocyte | 5.30e-16 | 115 |
macrophage dendritic cell progenitor | 1.46e-14 | 61 |
monopoietic cell | 1.41e-13 | 59 |
monocyte | 1.41e-13 | 59 |
monoblast | 1.41e-13 | 59 |
promonocyte | 1.41e-13 | 59 |
hematopoietic lineage restricted progenitor cell | 5.01e-12 | 120 |
granulocyte monocyte progenitor cell | 1.66e-11 | 67 |
myeloid leukocyte | 1.86e-11 | 72 |
myeloid lineage restricted progenitor cell | 4.12e-09 | 66 |
hematopoietic stem cell | 9.46e-09 | 168 |
hematopoietic cell | 1.86e-08 | 177 |
hematopoietic oligopotent progenitor cell | 5.85e-08 | 161 |
hematopoietic multipotent progenitor cell | 5.85e-08 | 161 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.49e-12 | 98 |
blood island | 2.49e-12 | 98 |
hemolymphoid system | 7.22e-11 | 108 |
bone marrow | 2.77e-09 | 76 |
lateral plate mesoderm | 3.14e-09 | 203 |
immune system | 1.10e-08 | 93 |
skeletal element | 1.15e-07 | 90 |
mesoderm | 2.75e-07 | 315 |
mesoderm-derived structure | 2.75e-07 | 315 |
presumptive mesoderm | 2.75e-07 | 315 |
bone element | 8.38e-07 | 82 |