FFCP PHASE1:Hg19::chr22:45958896..45958922,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr22:45958896..45958922,+ | |||
|coexpression_cluster_id=C518 | |||
|description=CAGE_peak_at_chr22:45958896..45958922,+ | |description=CAGE_peak_at_chr22:45958896..45958922,+ | ||
|id=chr22:45958896..45958922,+ | |id=chr22:45958896..45958922,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002561;2.33e-17;2!CL:0002622;6.53e-12;3!CL:0002521;1.43e-11;3!CL:0000214;1.43e-11;3!CL:0002581;1.02e-09;1!CL:0000153;1.63e-08;9!CL:0000447;1.63e-08;9!CL:0002559;1.79e-07;5!CL:0000499;4.94e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0002561,1.37e-17,2;CL:0002622,4.35e-12,3;CL:0000214,7.92e-12,3;CL:0002521,1.16e-11,3;CL:0002581,9.44e-10,1;CL:0000153,1.42e-08,9;CL:0000447,1.42e-08,9;CL:0002559,1.46e-07,5;CL:0000499,4.16e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.65e-09;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.07e-10!9;UBERON:0001046!1.28e-07!19;UBERON:0000162!6.85e-07!14;UBERON:0001353!6.85e-07!14;UBERON:0000163!6.85e-07!14;UBERON:0006866!6.85e-07!14;UBERON:0000164!6.85e-07!14;UBERON:0000931!6.85e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;2.33e-17;2!UBERON:0005942;2.33e-17;2!UBERON:0005932;2.33e-17;2!UBERON:0006915;1.43e-11;3!UBERON:0007616;1.43e-11;3!UBERON:0002217;1.43e-11;3!UBERON:0002018;1.43e-11;3!UBERON:0002190;1.43e-11;3!UBERON:0000077;3.03e-10;27!UBERON:0000996;2.65e-09;1!UBERON:0001987;6.72e-09;4!UBERON:0004457;1.63e-08;9!UBERON:0000042;1.63e-08;9!UBERON:0002073;1.79e-07;5!UBERON:0002072;2.76e-07;5!UBERON:0002367;3.50e-07;11!UBERON:0010147;3.50e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005933,1.37e-17,2;UBERON:0005942,1.37e-17,2;UBERON:0005932,1.37e-17,2;UBERON:0006915,7.92e-12,3;UBERON:0007616,7.92e-12,3;UBERON:0002217,7.92e-12,3;UBERON:0002018,7.92e-12,3;UBERON:0002190,1.16e-11,3;UBERON:0000077,1.19e-09,29;UBERON:0000162,1.63e-09,14;UBERON:0001353,1.63e-09,14;UBERON:0000163,1.63e-09,14;UBERON:0006866,1.63e-09,14;UBERON:0000164,1.63e-09,14;UBERON:0000931,1.63e-09,14;UBERON:0000996,1.69e-09,1;UBERON:0001987,3.99e-09,4;UBERON:0004340,3.99e-09,4;UBERON:0004122,6.87e-09,15;UBERON:0002073,1.46e-07,5;UBERON:0005086,1.46e-07,5;UBERON:0002072,2.43e-07,5;UBERON:0002367,3.29e-07,11;UBERON:0010147,3.29e-07,11;UBERON:0009846,3.29e-07,11;UBERON:0003353,3.29e-07,11;UBERON:0004902,3.29e-07,11;UBERON:0003820,3.29e-07,11;UBERON:0009847,3.29e-07,11;UBERON:0001046,4.85e-07,19 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,1.0007329835313,0,0,0,1.26343974685366,1.30592814099919,0,0,0,0.263766978228454,0.247532705920093,0.331397375727916,0,0,0.730310090387373,0,0.246242116153576,0.612002073732759,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,1.0843174571537,0,0.144846518960824,0,0,0.283604451492204,0.221729397462564,0.351339142772504,0.196468613246569,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0.354668382198357,0,0,0,0,0,0,0.151357427644931,1.15235184896,0.234321431833797,0.624320153660641,0.570471821544449,1.04614076386261,0,0,0,0.61246251376468,0.122834317311768,0.206651562351531,0,0.989067717114227,0,0.718618141816238,0,0.250237039743928,0.277064115484183,0,0.30648779579902,0.45071417671979,0,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,1.2931684545505,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0.207322110030741,0,0.36497735907583,0,0,0,1.39310378409594,5.0531563716871,0.828147600278907,0.505754070234305,0.482022059766964,0.882351781859152,0.653638332277218,0.237270619111097,1.07865046528132,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0.411309970813294,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.03985430765404,1.24900292158013,0.788512075169673,0.35142424497814,0,0,2.0694614258501,0,0.368738337083406,0.434418072340414,0.195801157462741,0,0,0,0,0,1.66435439510497,0,0,0,0.280660094433074,0,0,0,2.96836132889982,0,0,0.0821271560138091,0,0,0.725156697549733,0,0,0.34444334449382,1.63882051206045,6.42509633301178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.824328093181778,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,2.1396949401696,0.636406495851874,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0,0,0.409499734223957,1.1312434556297,0,0,0,0,0,0.655894752046633,0,0,0.281695602532241,0.430234056612155,0.0982490410131212,0,0,1.26664581178598,1.97576935775941,0,0.699869440489966,0,0,0,0.470719003883896,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0.923403102045565,0,0.69169171316418,0.269272933229316,0.325942115766024,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0.282706142867882,0.216388639742091,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.505492637027904,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.0821154570532092,0.193978032976839,0,0.451961481561065,0,0,0,0.391102765469606,0.0801588202515337,0.85381197895741,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0.157566364614447,0,0.13480708770837,0,0,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0.714695326373367,0,0,0.542999601753713,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,1.20008329398946,0,0.336749488765919,0,0,0,0,0.226705925512272,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0.169732529954025,0,0.247871528518004,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300841313397029,0,0.781514011233092,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,1.33053555243958,0,0.171488009437418,0,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0.801711364730253,0,0.17071847709395,0,0,0,0,0.423387050190929,0,0,0,0.559277158988962,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,0.924351257262837,0,0.126166424835079,0.109265571963696,0.126698501011437,0,0,0,0.50141507858475,0,0,0,0,0,0.23806443146374,0,0,0.224263725161227,0,0.202117188958219,0,0,0,0.143444410785353,0.99798106963804,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,1.33151354837103,0,0 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| ||
|short_description=p@chr22:45958896..45958922,+ | |short_description=p@chr22:45958896..45958922,+ | ||
}} | }} |
Latest revision as of 22:05, 28 July 2015
Short description: | p@chr22:45958896..45958922, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr22:45958896..45958922, + |
Coexpression cluster: | C518_sacrococcigeal_Prostate_Mesenchymal_Fibroblast_tridermal_Hair_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
outer root sheath cell | 1.37e-17 | 2 |
prostate stromal cell | 4.35e-12 | 3 |
synovial cell | 7.92e-12 | 3 |
subcutaneous fat cell | 1.16e-11 | 3 |
perirenal preadipocyte | 9.44e-10 | 1 |
GAG secreting cell | 1.42e-08 | 9 |
carbohydrate secreting cell | 1.42e-08 | 9 |
hair follicle cell | 1.46e-07 | 5 |
stromal cell | 4.16e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
hair root sheath | 1.37e-17 | 2 |
hair outer root sheath | 1.37e-17 | 2 |
bulb of hair follicle | 1.37e-17 | 2 |
stratified squamous epithelium | 7.92e-12 | 3 |
layer of synovial tissue | 7.92e-12 | 3 |
synovial joint | 7.92e-12 | 3 |
synovial membrane of synovial joint | 7.92e-12 | 3 |
subcutaneous adipose tissue | 1.16e-11 | 3 |
mixed endoderm/mesoderm-derived structure | 1.19e-09 | 29 |
cloaca | 1.63e-09 | 14 |
anal region | 1.63e-09 | 14 |
embryonic cloaca | 1.63e-09 | 14 |
terminal part of digestive tract | 1.63e-09 | 14 |
primitive urogenital sinus | 1.63e-09 | 14 |
proctodeum | 1.63e-09 | 14 |
vagina | 1.69e-09 | 1 |
placenta | 3.99e-09 | 4 |
allantois | 3.99e-09 | 4 |
genitourinary system | 6.87e-09 | 15 |
hair follicle | 1.46e-07 | 5 |
hair follicle placode | 1.46e-07 | 5 |
hypodermis | 2.43e-07 | 5 |
prostate gland | 3.29e-07 | 11 |
male accessory sex gland | 3.29e-07 | 11 |
embryonic cloacal epithelium | 3.29e-07 | 11 |
epithelium of hindgut | 3.29e-07 | 11 |
urogenital sinus epithelium | 3.29e-07 | 11 |
prostate bud | 3.29e-07 | 11 |
prostate field | 3.29e-07 | 11 |
hindgut | 4.85e-07 | 19 |