FFCP PHASE1:Hg19::chr2:101972682..101972687,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:101972682..101972687,- | |||
|coexpression_cluster_id=C170 | |||
|description=CAGE_peak_at_chr2:101972682..101972687,- | |description=CAGE_peak_at_chr2:101972682..101972687,- | ||
|id=chr2:101972682..101972687,- | |id=chr2:101972682..101972687,- | ||
|ontology_enrichment_celltype=CL:0002150!2.82e-30!3;CL:0000861!2.82e-30!3;CL:0000066!3.93e-12!254;CL:0002563!1.95e-10!4;CL:0000235!1.73e-09!10;CL:0002251!2.48e-07!21 | |ontology_enrichment_celltype=CL:0002150!2.82e-30!3;CL:0000861!2.82e-30!3;CL:0000066!3.93e-12!254;CL:0002563!1.95e-10!4;CL:0000235!1.73e-09!10;CL:0002251!2.48e-07!21 | ||
|ontology_enrichment_celltype_v019=CL:0002253;2.21e-15;2!CL:0002563;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.37e-15,2;CL:0002563,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.89e-09;29 | |||
|ontology_enrichment_disease=DOID:305!1.97e-26!106;DOID:0050687!6.73e-19!143;DOID:162!2.41e-10!235;DOID:14566!4.53e-10!239 | |ontology_enrichment_disease=DOID:305!1.97e-26!106;DOID:0050687!6.73e-19!143;DOID:162!2.41e-10!235;DOID:14566!4.53e-10!239 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,2.72e-13,106;DOID:0050687,6.71e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.33e-84!9;UBERON:0001557!1.52e-39!19;UBERON:0008947!3.33e-19!38;UBERON:0003258!3.33e-19!38;UBERON:0000072!1.17e-15!46;UBERON:0001004!2.67e-14!72;UBERON:0000065!1.99e-13!53;UBERON:0000344!1.08e-12!12;UBERON:0001242!1.95e-10!4;UBERON:0001262!1.95e-10!4;UBERON:0004786!1.95e-10!4;UBERON:0004808!1.95e-10!4;UBERON:0001277!1.95e-10!4;UBERON:0003343!3.61e-10!4;UBERON:0004785!3.61e-10!4;UBERON:0001007!1.14e-09!155;UBERON:0001555!1.14e-09!155;UBERON:0007026!1.14e-09!155;UBERON:0004119!1.10e-08!169;UBERON:0000925!1.10e-08!169;UBERON:0006595!1.10e-08!169;UBERON:0004921!1.13e-08!129;UBERON:0004185!1.13e-08!129;UBERON:0003350!1.60e-08!5;UBERON:0000064!1.80e-08!219;UBERON:0000063!2.00e-08!97;UBERON:0003729!2.60e-08!5;UBERON:0000077!3.23e-07!130 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.05e-28;9!UBERON:0001557;1.05e-28;9!UBERON:0001052;2.35e-08;4!UBERON:0001242;2.35e-08;4!UBERON:0001262;2.35e-08;4!UBERON:0004786;2.35e-08;4!UBERON:0004808;2.35e-08;4!UBERON:0001277;2.35e-08;4!UBERON:0000072;5.52e-07;37!UBERON:0004907;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,9.98e-29,9;UBERON:0001557,4.74e-14,19;UBERON:0001052,2.43e-08,4;UBERON:0001242,2.43e-08,4;UBERON:0001262,2.43e-08,4;UBERON:0004786,2.43e-08,4;UBERON:0004808,2.43e-08,4;UBERON:0001277,2.43e-08,4;UBERON:0008947,2.27e-07,38;UBERON:0003258,2.27e-07,38;UBERON:0004907,6.39e-07,5 | |||
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|short_description=p@chr2:101972682..101972687,- | |short_description=p@chr2:101972682..101972687,- | ||
}} | }} |
Latest revision as of 22:43, 28 July 2015
Short description: | p@chr2:101972682..101972687, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:101972682..101972687, - |
Coexpression cluster: | C170_epitheloid_cervical_Hep2_keratoacanthoma_adult_neuroblastoma_signet |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.37e-15 | 2 |
intestinal epithelial cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
larynx | 9.98e-29 | 9 |
upper respiratory tract | 4.74e-14 | 19 |
rectum | 2.43e-08 | 4 |
intestinal mucosa | 2.43e-08 | 4 |
wall of intestine | 2.43e-08 | 4 |
gastrointestinal system mucosa | 2.43e-08 | 4 |
gastrointestinal system epithelium | 2.43e-08 | 4 |
intestinal epithelium | 2.43e-08 | 4 |
respiratory primordium | 2.27e-07 | 38 |
endoderm of foregut | 2.27e-07 | 38 |
lower digestive tract | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.72e-13 | 106 |
cell type cancer | 6.71e-10 | 143 |