FFCP PHASE1:Hg19::chr2:152685303..152685308,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:152685303..152685308,+ | |||
|coexpression_cluster_id=C122 | |||
|description=CAGE_peak_at_chr2:152685303..152685308,+ | |description=CAGE_peak_at_chr2:152685303..152685308,+ | ||
|id=chr2:152685303..152685308,+ | |id=chr2:152685303..152685308,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;4.20e-07;1!CL:0000228;4.20e-07;1!CL:0002372;4.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000228,4.34e-07,1;CL:0002372,4.34e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0009847;6.85e-09;3!UBERON:0003353;6.85e-09;3!UBERON:0006238;7.74e-09;10 | |||
|ontology_enrichment_disease=DOID:14566!8.13e-34!239;DOID:162!1.75e-33!235;DOID:0050686!1.24e-21!137;DOID:0050687!3.33e-18!143;DOID:2531!6.07e-12!51;DOID:0060083!6.07e-12!51;DOID:305!3.05e-11!106;DOID:1240!2.97e-10!39;DOID:1749!2.98e-08!14 | |ontology_enrichment_disease=DOID:14566!8.13e-34!239;DOID:162!1.75e-33!235;DOID:0050686!1.24e-21!137;DOID:0050687!3.33e-18!143;DOID:2531!6.07e-12!51;DOID:0060083!6.07e-12!51;DOID:305!3.05e-11!106;DOID:1240!2.97e-10!39;DOID:1749!2.98e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:1036;1.42e-12;8!DOID:3093;4.15e-08;11!DOID:0060060;1.79e-07;1!DOID:0060061;1.79e-07;1!DOID:8691;1.79e-07;1!DOID:3112;4.20e-07;1!DOID:1240;6.38e-07;39!DOID:1749;9.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,3.12e-14,235;DOID:14566,8.02e-14,239;DOID:1036,1.83e-12,8;DOID:0050686,6.36e-09,137;DOID:1240,9.82e-09,39;DOID:2531,4.10e-08,51;DOID:0060083,4.10e-08,51;DOID:3093,4.32e-08,11;DOID:0060060,1.85e-07,1;DOID:0060061,1.85e-07,1;DOID:8691,1.85e-07,1;DOID:3112,4.08e-07,1;DOID:1749,9.54e-07,14 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0007195;1.27e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007195,1.20e-07,1;UBERON:0003343,9.11e-07,4;UBERON:0004785,9.11e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0,0.426507697462265,0.293600439334847,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0.560425719967636,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.929683027679674,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,1.65403886981437,0.214840489736547,0.145016693914229,0.255679882248303,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,0.245040215981032,0,1.15415370381156,0.711418433484141,3.18852545457645,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.481764225311099,0,1.70338495076131,0.343505344755765,0,0,0,0,0.278406173895242,0,0.540911356951966,0.99921590399346,0,0,0,0,0.111443384277478,0.852408440419239,0,0,0,0,0,0,0.659215496907038,0.422250816255987,0,0,0,0,0.492339221844278,0,0.359473404589307,0,0,0,0,3.33410970433911,0,0,0,0,0.524759999977174,0,1.0241410345695,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.544692317594951,0,0,0.797594390929008,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0.664846727600626,0.451191321234361,0,0.167821586975843,37.5712390793886,3.01979500062719,1.47698645169619,0.979396848954886,2.40300221437699,0,0,0,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,1.94224303627274,0,0,0,0,0.60129367765797,0,0,0,0.313932918407225,0,0.853828638089378,0,0.173559738335131,0.0979923974143777,1.30588809870604,0,0.859930162358083,0.0967563312890851,0,0,0,0,0,2.87788041758177,0.397429223405979,0,0,0,0,0,0.576361668616424,0.343609788497747,0.171594997861965,1.1524383839052,0,0.235694034616795,2.44627570932505,1.882851233622,1.01998217636322,0.866851769704557,0,0,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0.950403028674658,0,0.767660789277781,0,0,7.62805612964249,0,0,0,0,6.48530913919778,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.553394539744923,2.12466693535581,0.758245587708239,0.285465333544967,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0,0.450772826991655,0,0,0,0.751873899297419,0,0,0.800055529326307,0,0,0,0,0.643324774124777,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.512483037175893,0,0,0,0,0.132864840313363,0,0,0,0.422624246717254,2.39984875025916,0,0,0,0.736423801007363,0,0,0.76736622782191,0.539124056983409,2.04445724412665,0.109209638192014,1.01839517972415,0.637724760305049,0.619678821295011,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,1.29766695682514,0.183428598521679,1.96393632455575,0,0,0.596748666348824,0,0,0,0,1.47394725759087,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.921871900446234,0,0,0,1.65471377237555,2.66955364540966,0,0.157115589916002,0,0,0.215927591218621,0,0,0.316027223465453,0.813689977576877,1.73858272302579,0,0,0,0,0,0.473328002922261,0.511280428554946,0,0.68732060563215,0,0,0.447421727191169,0.098150233615243,0.609589624911347,0,0,0,0.971421986118279,0,0.994753875806841,0.237840181555137,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.357107877211315,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.258355639344024,0,0.672791175483681,0,0,0,0,0,0,0,0.976839223331694,0.106727345877715,0,0.538951212639521,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.247532705920093,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0.152826811495903,0,0,0,0.767658796194425,0.154816123316076,0,0,0.369754010166788,0,0.426507697462265,0.293600439334847,0.553995408531877,0.601633342410425,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.526768169550154,0.196709770113833,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.130059347559878,0,0.276350017785848,0,0,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0.225222960966644,1.53316637465883,0,0,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0.140450806702248,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358234090811393,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0,0,0,0.560425719967636,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0.664225598535437,0.184369168541703,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410635780069046,0,0.929683027679674,0,0,0,0.114814448164607,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.616194468458578,0.15350367472613,1.65403886981437,0.214840489736547,0.145016693914229,0.255679882248303,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,1.34060455107157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0.962479855263359,0.245040215981032,0,1.15415370381156,0.711418433484141,3.18852545457645,0,0.191505370132367,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0.169291777801603,0.481764225311099,0,1.70338495076131,0.343505344755765,0,0,0,0,0.278406173895242,0,0.540911356951966,0.99921590399346,0,0,0,0,0.111443384277478,0.852408440419239,0,0,0,0,0,0,0.659215496907038,0.422250816255987,0,0,0,0,0.492339221844278,0,0.359473404589307,0,0,0,0,3.33410970433911,0,0,0,0,0.524759999977174,0,1.0241410345695,0,0,0.344743373241465,0.583209226766509,0.173624994933292,0,0,0,0,0,0,0.544692317594951,0,0,0.797594390929008,0,0,0,0,0,0,1.02193298195737,0.31396051279005,0.664846727600626,0.451191321234361,0,0.167821586975843,37.5712390793886,3.01979500062719,1.47698645169619,0.979396848954886,2.40300221437699,0,0,0,0,0,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0.182454789215666,0,1.94224303627274,0,0,0,0,0.60129367765797,0,0,0,0.313932918407225,0,0.853828638089378,0,0.173559738335131,0.0979923974143777,1.30588809870604,0,0.859930162358083,0.0967563312890851,0,0,0,0,0,2.87788041758177,0.397429223405979,0,0,0,0,0,0.576361668616424,0.343609788497747,0.171594997861965,1.1524383839052,0,0.235694034616795,2.44627570932505,1.882851233622,1.01998217636322,0.866851769704557,0,0,0,0,2.36598618851383,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0.254019996197353,0,0,0,0,0,0.449947783103001,0,0,0.335434687599266,0,0,0.950403028674658,0,0.767660789277781,0,0,7.62805612964249,0,0,0,0,6.48530913919778,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0.0620964029413835,0.553394539744923,2.12466693535581,0.758245587708239,0.285465333544967,0,0,0,0.298509605773748,0.233713309847224,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0.265841714557995,0,0.450772826991655,0,0,0,0.751873899297419,0,0,0.800055529326307,0,0,0,0,0.643324774124777,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0.168942440653073,0.512483037175893,0,0,0,0,0.132864840313363,0,0,0,0.422624246717254,2.39984875025916,0,0,0,0.736423801007363,0,0,0.76736622782191,0.539124056983409,2.04445724412665,0.109209638192014,1.01839517972415,0.637724760305049,0.619678821295011,0.558644917973244,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196295437002051,1.29766695682514,0.183428598521679,1.96393632455575,0,0,0.596748666348824,0,0,0,0,1.47394725759087,0.295712172434091,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0.921871900446234,0,0,0,1.65471377237555,2.66955364540966,0,0.157115589916002,0,0,0.215927591218621,0,0,0.316027223465453,0.813689977576877,1.73858272302579,0,0,0,0,0,0.473328002922261,0.511280428554946,0,0.68732060563215,0,0,0.447421727191169,0.098150233615243,0.609589624911347,0,0,0,0.971421986118279,0,0.994753875806841,0.237840181555137,0.11294608203896,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0.357107877211315,0.352894871715692,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.126166424835079,0.109265571963696,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.258355639344024,0,0.672791175483681,0,0,0,0,0,0,0,0.976839223331694,0.106727345877715,0,0.538951212639521,0,0,0,0,0,0 | ||
|short_description=p@chr2:152685303..152685308,+ | |short_description=p@chr2:152685303..152685308,+ | ||
}} | }} |
Latest revision as of 01:26, 29 July 2015
Short description: | p@chr2:152685303..152685308, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:152685303..152685308, + |
Coexpression cluster: | C122_chronic_Reticulocytes_skeletal_leukemia_acute_colon_Tracheal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multinucleate cell | 4.34e-07 | 1 |
myotube | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
stroma of bone marrow | 1.20e-07 | 1 |
mucosa of oral region | 9.11e-07 | 4 |
respiratory system mucosa | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
cancer | 3.12e-14 | 235 |
disease of cellular proliferation | 8.02e-14 | 239 |
chronic leukemia | 1.83e-12 | 8 |
organ system cancer | 6.36e-09 | 137 |
leukemia | 9.82e-09 | 39 |
hematologic cancer | 4.10e-08 | 51 |
immune system cancer | 4.10e-08 | 51 |
nervous system cancer | 4.32e-08 | 11 |
non-Hodgkin lymphoma | 1.85e-07 | 1 |
cutaneous T cell lymphoma | 1.85e-07 | 1 |
mycosis fungoides | 1.85e-07 | 1 |
papillary adenocarcinoma | 4.08e-07 | 1 |
squamous cell carcinoma | 9.54e-07 | 14 |